DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx1 and SNX8

DIOPT Version :9

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_037453.1 Gene:SNX8 / 29886 HGNCID:14972 Length:465 Species:Homo sapiens


Alignment Length:442 Identity:95/442 - (21%)
Similarity:175/442 - (39%) Gaps:136/442 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GAATGSEDEEE---------------------EVPAPGSVTLDRNESDLFVSALSPSSIGDIHPL 63
            |||..:|.:||                     :||||..:.:.:. :.|.:|          |.|
Human    15 GAAAEAEADEEADPPASDLPTPQAIEPQAIVQQVPAPSRMQMPQG-NPLLLS----------HTL 68

  Fly    64 QEVLTDDGDYFISIVVSDPQKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLV 128
            ||:|..| ...:.::   |:|.|..: .::.|:|:::    :||.|.:   ||::||:...::|:
Human    69 QELLARD-TVQVELI---PEKKGLFL-KHVEYEVSSQ----RFKSSVY---RRYNDFVVFQEMLL 121

  Fly   129 GKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHPVLRVD 193
            .|:..  |::|..|.|.::|:.:                |::|.||.||:|||:..|:||:...|
Human   122 HKFPY--RMVPALPPKRMLGADR----------------EFIEARRRALKRFVNLVARHPLFSED 168

  Fly   194 LD---FMNFLESDQE--------------------------LPRSVNTSALSGAGVIR----LFN 225
            :.   |::|..||.:                          ||..:.........:||    .|:
Human   169 VVLKLFLSFSGSDVQNKLKESAQCVGDEFLNCKLATRAKDFLPADIQAQFAISRELIRNIYNSFH 233

  Fly   226 KVGETVNKITYKMDEN--DPWFDDKITEVESLDANLQKL-------HNAMKSLVTSRRELSLLTG 281
            |:.:...:|..:..:|  |.....|  |:.::.::...|       .:...||..:.:.||:...
Human   234 KLRDRAERIASRAIDNAADLLIFGK--ELSAIGSDTTPLPSWAALNSSTWGSLKQALKGLSVEFA 296

  Fly   282 LVAKSAAMLSTCEEHTGLSRALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIF 346
            |:|..||.....||:           ||.||:.|         |..|.:..||......  |.:.
Human   297 LLADKAAQQGKQEEN-----------DVVEKLNL---------FLDLLQSYKDLCERHE--KGVL 339

  Fly   347 HERVKAFQNWQYAQMQ-LSKRRENRGRFELANRADKLDQAQQEVDEWQGKVQ 397
            |:..:|...:...:.| :|...:||       ..:.::|.:..:.|.:..:|
Human   340 HKHQRALHKYSLMKRQMMSATAQNR-------EPESVEQLESRIVEQENAIQ 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 34/130 (26%)
BAR_SNX1_2 232..455 CDD:153307 35/176 (20%)
SNX8NP_037453.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 6/20 (30%)
PX_SNX8_Mvp1p_like 75..178 CDD:132776 34/132 (26%)
BAR_SNX8 195..440 CDD:153281 41/221 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5391
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.