DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and Snx8

DIOPT Version :9

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_006504735.1 Gene:Snx8 / 231834 MGIID:2443816 Length:460 Species:Mus musculus


Alignment Length:377 Identity:82/377 - (21%)
Similarity:152/377 - (40%) Gaps:99/377 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 HPLQEVLTDDGDYFISIVVSDPQKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHD 125
            :.|||:|..| ...:.::   |:|.|..: .::.|:|:::    :||.|.:   ||::||:..|:
Mouse    62 YTLQELLAKD-TVQVELI---PEKKGLFL-KHVEYEVSSQ----RFKSSVY---RRYNDFVVFHE 114

  Fly   126 LLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHPVL 190
            :|:.|:..  |::|..|.|.::|:.:                |::|.||.||:||::..|:||..
Mouse   115 VLLHKFPY--RMVPALPPKRVLGADR----------------EFIEGRRRALKRFINLVARHPPF 161

  Fly   191 RVDL---DFMNFLESDQE--------------------------LPRSVNTSALSGAGVIR---- 222
            ..|:   .|::|..||.:                          ||..:.|.......:||    
Mouse   162 SEDVLLKLFLSFSGSDVQHKLKEAAQCVGDEFMNCKLAARAKDFLPADIQTQFAMSRELIRNVYN 226

  Fly   223 LFNKVGETVNKITYKMDENDP---WFDDKITEVESLDANLQK---LH-NAMKSLVTSRRELSLLT 280
            .|.|:.:...:|..:..:|..   .|..:::.:.|....|..   || :...||..:.:.||:..
Mouse   227 SFYKLRDRAERIASRAIDNAADLLIFGKELSALGSDTTPLPSWAALHLSTWGSLKQALKGLSVEF 291

  Fly   281 GLVAKSAAMLSTCEEHTGLSRALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCI 345
            .|:|..||.....||:           ||.||:.|         |..|.:..||......  |.:
Mouse   292 ALLADRAAQQGKKEEN-----------DVVEKLNL---------FLDLLQSYKDLCERHE--KGV 334

  Fly   346 FHERVKAFQNWQYAQMQLSKRRENRGRFELANRADKLDQAQQEVDEWQGKVQ 397
            .|:..:|...:...:.|:......|       ..:.::|.:..:.|.:..:|
Mouse   335 LHKHQRALHKYGLMKRQMMSAAHGR-------EPESVEQLESRIVEQENVIQ 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 34/130 (26%)
BAR_SNX1_2 232..455 CDD:153307 34/173 (20%)
Snx8XP_006504735.1 PX_SNX8_Mvp1p_like 71..174 CDD:132776 34/132 (26%)
BAR_SNX8 191..435 CDD:153281 41/218 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5391
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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