Protein Alignment Snx1 and lst-4

DIOPT Version :9

• Sequence 1: NP_608777.1
• Gene: Snx1 / 33560
• FlyBaseID: FBgn0031534
• Length: 458
• Species: Drosophila melanogaster
• Sequence 2: NP_001379029.1
• Gene: lst-4 / 178361
• WormBaseID: WBGene00003086
• Length: 592
• Species: Caenorhabditis elegans
• Alignment Length: 501
• Identity: 96/501 - (19%)
• Similarity: 180/501 - (35%)
• Gaps: 137/501 - (27%)

  Fly     2 EVESPEHTRDFAEVDI--NNGAATGSEDEEEEVPAPGSVTLDRN------------ESDLFVSAL 52
            |.:..|.||...:..|  |:.........|...|..||..:::|            |:.:...:.
 Worm   162 EDDEQEPTRPNVQSSIGSNSRRDLSRSHSEHGGPDRGSNKVNKNINRFSNFVKSGVEAYVIGESK 226

  Fly    53 SPSSIGDIHPLQEVLTDDG-------DYFISIVVSDPQKIG--DGMGSYLAYKVTTK-TNIPKFK 107
            :.|.|.:.|   ||:.::|       ..:.:.:|..|:|..  .|:.|::||.:|:. |||.:
 Worm   227 TTSQISERH---EVVMNNGIIQWKPIQQYYTCIVDKPKKESKLKGLKSFIAYSITSSLTNIQR-- 286

  Fly   108 RSEFSTLRRFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEI 172
                ...||:..|..:|:.|..||:.:.  |||.|.|.:.|..:               ::.::.
 Worm   287 ----QVSRRYKHFDWLHEQLSAKYVLIP--IPPLPEKQVAGRYE---------------EDLIDH 330

  Fly   173 RRAALERFVHRTAQHPVLRVDLDFMNFLESDQELP------RSVNTSALSGAGV----------- 220
            |:..|:.:|::..:||||.....:::|:....|..      |:.....:.||.:
 Worm   331 RKHILQLWVNKICRHPVLSQSEVWLHFISCTDEKDWKNGKRRAEKDEYIGGAFLNCITVPHQPLD 395

  Fly   221 -------IRLFNKVGETVNKITYKMDENDPWFDDKITEVESLDANLQKLHNAMKSL--------- 269
                   :..|.:..:|..:....|.|....|....  ...:..|.||:.:|.|:|
 Worm   396 PNNVDMQVERFQRSVKTSEEAMRVMQERMNMFQKVF--AGPVKQNWQKMGSAFKTLQQSFEIDET 458

  Fly   270 VTSRRELSLLTGLVAKSAAMLSTCEEHTGLSRALSNLADVEEKIELLRSEQANSDFFILAEFIKD 334
            |.|||                        |:.||:..|....:|..:......:|...:.|.:..
 Worm   459 VASRR------------------------LTEALAYTASEYHEIGQVFDAHTKNDMEPVLENLYS 499

  Fly   335 YLGLFGAIKCIFHERVKAFQNWQYAQMQLSKRRENRGRFELANRADKLDQAQQEVDEWQGKVQRC 399
            |.|....:..|.....:|.|          |.|::.||...|                  :.::.
 Worm   500 YKGTVQNVPDIIQVHKQAVQ----------KFRDSEGRLSSA------------------EAEKM 536

  Fly   400 QQQFDDISAEIKREMERFELTRVKDFKVNIIKYIEDQMAHQQQIVS 445
            :|:.|.:|..:..|::.....:|:|.|..:..|::.|....|::.:
 Worm   537 KQRIDAMSYTVIAEVQHQTAEKVEDMKSTMGTYLKKQAMFYQEVAT 582

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snx1	NP_608777.1	PX_SNX1_2_like	75..203	CDD:132769	32/130 (25%)
		BAR_SNX1_2	232..455	CDD:153307	40/223 (18%)
lst-4	NP_001379029.1	PX_SNX9_18_like	253..379	CDD:132772	34/148 (23%)
		BAR	362..592	CDD:416402	46/275 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1659
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.940