DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and Galnt5

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_113984.1 Gene:Galnt5 / 83627 RGDID:620361 Length:930 Species:Rattus norvegicus


Alignment Length:532 Identity:216/532 - (40%)
Similarity:303/532 - (56%) Gaps:60/532 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 PG--GRLPVAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRNPM 191
            ||  ||..|.|.|:..|.|...:.|                 .||...||.:|.:|.|.|||...
  Rat   428 PGQFGRPVVVPPGKKKEAEQRWKEG-----------------NFNVYLSDLIPVDRAIEDTRPAG 475

  Fly   192 CRTKKYREDLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYS--DHPEDGLE-- 252
            |..:....|||.||:|:.|.:|..|.|||::.|||||||.|||:||:||||:|  |:.:..|:  
  Rat   476 CAEQLVHNDLPTTSIIMCFVDEVWSALLRSVHSVLNRSPPHLIKEILLVDDFSTKDYLKANLDKY 540

  Fly   253 LAKIDKVRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVVCP 317
            :::..|||::|..:|.||:|:|:.||..|...||||||||||||..|||||||||..:..:|.||
  Rat   541 MSQFPKVRILRLKERHGLIRARLAGAQNATGDVLTFLDSHVECNVGWLEPLLERVYLNRKKVACP 605

  Fly   318 VIDVI--------SMDNFQYIGASADLRGGFDWNLIFKWEYLSPSERAMRHNDPTTAIRTPMIAG 374
            ||:||        ::||||        ||.|.|.:.|.|..:.|...|......|..||.|::||
  Rat   606 VIEVINDKDMSYMTVDNFQ--------RGVFTWPMNFGWRTIPPDVIAKNGIKETDIIRCPVMAG 662

  Fly   375 GLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGS 439
            |||.|||:||.:||.||..:|||||||:|:||:||.|||.:||||||||||:||..:||:||...
  Rat   663 GLFSIDKSYFYELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVGHIFRNDNPYSFPKDR 727

  Fly   440 GNVFARNTRRAAEVWMDDYKQHYYNAVP--LAKNIPFGNIDDRLALKEKLHCKPFKWYLENVYPD 502
            .....||..|.||||:|:||:.:|....  :.:.:..||:..:..|::||.|:.|||||:||:||
  Rat   728 MKTVERNLVRVAEVWLDEYKELFYGHGDHLIDQGLDVGNLTQQRELRKKLKCQSFKWYLDNVFPD 792

  Fly   503 LQAPDPQEVGQFRQDST-ECLDTMGHLIDGTVGIFPCHNTGGNQEWAFTKRGEIKHDDLCLTLVT 566
            |:||..:..|.|...:. :|:.    :.:.||.:..|..:...|::.:|....|||.:.|:..:.
  Rat   793 LKAPVVRASGVFINLALGKCVS----IKNITVVLEDCDGSSELQQFNYTWVRLIKHGEWCVAPIP 853

  Fly   567 FARGSQVVLKACDDSENQ-RWIMREGG-----LVRH-----YKINVCLDSRDQSQQGVSAQHCNS 620
             .:|| :.|..||:..|: :|:.|...     ||.|     |:..:|::. :.||:.:....||.
  Rat   854 -DKGS-LTLYPCDNRNNRLKWLHRSASAFHPELVDHIVFESYQQLLCMEG-NFSQKTLKLAACNP 915

  Fly   621 ALGTQRWSFGKY 632
            ....|:|.|.||
  Rat   916 TEPQQKWKFEKY 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 128/243 (53%)
pp-GalNAc-T 205..500 CDD:133004 151/308 (49%)
Ricin_B_lectin 511..627 CDD:279046 30/127 (24%)
RICIN 513..629 CDD:238092 30/127 (24%)
Galnt5NP_113984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..210
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..377
WcaA 484..>599 CDD:223539 64/114 (56%)
Catalytic subdomain A 485..594 60/108 (56%)
pp-GalNAc-T 489..790 CDD:133004 151/308 (49%)
Catalytic subdomain B 654..716 42/61 (69%)
RICIN 804..925 CDD:214672 30/127 (24%)
RICIN 810..924 CDD:238092 29/120 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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