DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and galnt1

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_009290644.1 Gene:galnt1 / 559073 ZFINID:ZDB-GENE-030131-2360 Length:557 Species:Danio rerio


Alignment Length:640 Identity:254/640 - (39%)
Similarity:348/640 - (54%) Gaps:119/640 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KLIVFVSIIW----MFVMVYYFQ-SSTEKVENRALRLREVATAMQQYQDDSSSAAAASTARQWAP 65
            |:::..|::|    ||:::|:.: :..:..:.|.|..|:  |.:|:..|                
Zfish     8 KVVLATSLVWVMLDMFILLYFSECNKCDDKKERGLPGRD--TVVQRPHD---------------- 54

  Fly    66 AGGGAGPGAAAGAAGSGADDPGGNVILIGSVKDFERNAVHGLKLNGIVALEETSQGLSGGTGGPG 130
                 |||           :.|..|::   .||.:.......|:                     
Zfish    55 -----GPG-----------EMGKPVVI---AKDQQEKMKEMFKI--------------------- 79

  Fly   131 GRLPVAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRNPMCRTK 195
                                                 |:||..||:.:..||.:||.|...|:||
Zfish    80 -------------------------------------NQFNLMASEMIALNRSLPDVRLEGCKTK 107

  Fly   196 KYREDLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYS--DHPEDGLE--LAKI 256
            .|.:|||.|||:|.|||||.:|||||:.||::|||.||:.|||||||.|  |..:..||  :.|:
Zfish   108 VYPDDLPRTSVVIVFHNEAWTTLLRTVHSVIDRSPRHLLEEIVLVDDASERDFLKRQLEHYVRKL 172

  Fly   257 D-KVRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVVCPVID 320
            : .|||:|.::|.||:|:|:|||..:...|:||||:|.||...||||||.|::.|...||||:||
Zfish   173 EVPVRVVRMEQRSGLIRARLKGASISTGQVITFLDAHCECTTGWLEPLLSRIKLDKKTVVCPIID 237

  Fly   321 VISMDNFQYIGASADLRGGFDWNLIFKWEYLSPSERAMRHNDPTTAIRTPMIAGGLFVIDKAYFN 385
            |||.|.|:|:..|....|||:|.|.|:|..:...|...|..|.|..:|||.:|||||.||:.||.
Zfish   238 VISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQ 302

  Fly   386 KLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRA 450
            ::|.||..||:|||||||||||:|||||:|||:.||.|||||||..|||||||:|.:..:|.||.
Zfish   303 EIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRL 367

  Fly   451 AEVWMDDYKQHYYNAVPLAKNIPFGNIDDRLALKEKLHCKPFKWYLENVYPDLQAP-DPQEVGQF 514
            ||||||::|..:|...|....:.:|:|..|.:|:::|.||||.|||||||||.|.| ....:|:.
Zfish   368 AEVWMDEFKNFFYIISPGVTKVDYGDISTRTSLRQRLQCKPFSWYLENVYPDSQIPRHYYSLGEI 432

  Fly   515 RQ-DSTECLDTMGHLIDGTVGIFPCHNTGGNQEWAFTKRGEIKHDDLCLTLVTFARGSQVVLKAC 578
            |. ::.:|||.|....:..||||.||..||||.:::|...||:.|||||. |:...|..::||..
Zfish   433 RNVETNQCLDNMARKENEKVGIFNCHGMGGNQVFSYTANKEIRTDDLCLD-VSKLNGPVMMLKCH 496

  Fly   579 DDSENQRWIMREGGLVR----HYKINVCLD--SRDQSQQGVSAQHCNSALGTQRW 627
            ....||.|   |...|:    |...|.|||  |.|.||. .|.:.|:.| .:|:|
Zfish   497 HLKGNQLW---EYDPVKLSLVHVNSNQCLDKASEDDSQV-PSVRDCSGA-RSQQW 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 133/236 (56%)
pp-GalNAc-T 205..500 CDD:133004 163/299 (55%)
Ricin_B_lectin 511..627 CDD:279046 46/122 (38%)
RICIN 513..629 CDD:238092 46/122 (38%)
galnt1XP_009290644.1 pp-GalNAc-T 117..417 CDD:133004 163/299 (55%)
RICIN 430..548 CDD:238092 47/123 (38%)
Ricin_B_lectin 430..546 CDD:279046 46/121 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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