DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and Galnt12

DIOPT Version :10

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001413928.1 Gene:Galnt12 / 313233 RGDID:1562001 Length:576 Species:Rattus norvegicus


Alignment Length:541 Identity:233/541 - (43%)
Similarity:320/541 - (59%) Gaps:56/541 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 TGGPGGRLPVAP---------SGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSN 181
            |..||...||.|         ..:|..|..     .::...||..|:...|::.|...||.:..:
  Rat    50 TPHPGRHEPVLPRPPLPADALGAKGEAVRL-----QLQGEELRLQEESVQRHQINIYLSDRISLH 109

  Fly   182 RDIPDTRNPMCRTKKYRED-LPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYSD 245
            |.:|:..||:||..||..| ||:|||:|.|:|||.||||||:.|||..||:.|:.|::|||||||
  Rat   110 RRLPERWNPLCREVKYDYDNLPKTSVVIAFYNEAWSTLLRTVYSVLETSPDILLEEVILVDDYSD 174

  Fly   246 --HPEDGL--ELAKIDKVRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLER 306
              |.::.|  ||:::.|||:||..|||||||:|:.||.||...||||||.|.||:|.||||||:|
  Rat   175 REHLKEPLANELSQLPKVRLIRASKREGLVRARLLGASAARGEVLTFLDCHCECHEGWLEPLLQR 239

  Fly   307 VREDPTRVVCPVIDVISMDNFQYIGASADLR-GGFDWNLIFKWEYLSPSERAMRHNDPTTAIRTP 370
            :.|..:.|||||||||..:.|:|:|.|.:.: |||||.|:|.|..:...||.:..: |...||:|
  Rat   240 IHEKESAVVCPVIDVIDWNTFEYLGNSGEPQIGGFDWRLVFTWHVVPQRERKLMRS-PIDVIRSP 303

  Fly   371 MIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTF 435
            .:|||||.:.|.||..||.||..|:||||||||.|||:|||||:||..|||.|||||.|:.||  
  Rat   304 TMAGGLFAVSKRYFEYLGSYDTGMEVWGGENLEFSFRIWQCGGTLETHPCSHVGHVFPKQAPY-- 366

  Fly   436 PGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNIDDRLALKEKLHCKPFKWYLENVY 500
               |.:....|:.|||||||||:|:.||:..|.|:..|||::.:|..|:.||.||.|||:|:.||
  Rat   367 ---SRSKALANSVRAAEVWMDDFKELYYHRNPQARLEPFGDVTERKKLRAKLQCKDFKWFLDTVY 428

  Fly   501 PDLQAPD--PQEVGQFRQDSTE--CLD--------TMGHLIDGTVGIFPCHNTGGNQEWAFTKRG 553
            |:|..|:  |...|........  |||        ..||    .|.::.||..|.||.:.:|.|.
  Rat   429 PELHVPEDRPGFFGMLENRGLRGYCLDYNPPSENNVEGH----QVLLYLCHGMGQNQFFEYTSRQ 489

  Fly   554 EIKHD----DLCLTLVTFARGSQV-VLKACDDS--ENQRWIMREGGLVRHYKINVCLDSRDQSQQ 611
            ||:::    :.|:.:   ..|..| ::..|.|:  |||.::::|.|.:.|.:...|:::.::...
  Rat   490 EIRYNTRQPEACIAV---EEGKDVLIMDLCKDTVPENQEFVLQEDGTLVHKQSGKCVEATEKEFD 551

  Fly   612 GVSAQH---CNSALGTQRWSF 629
            ...|.|   |:|: ..|||.|
  Rat   552 TSFAPHLRDCSSS-DNQRWLF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 pp-GalNAc-T 205..500 CDD:133004 164/299 (55%)
beta-trefoil_Ricin_GALNT2 510..629 CDD:467312 35/138 (25%)
Galnt12NP_001413928.1 None

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