DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and Galnt18

DIOPT Version :10

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001073353.1 Gene:Galnt18 / 293181 RGDID:1309623 Length:607 Species:Rattus norvegicus


Alignment Length:530 Identity:185/530 - (34%)
Similarity:278/530 - (52%) Gaps:73/530 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 VAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRNPMCRTKKYRE 199
            ::|.||...::.|...||                  |...||.||.:|.:||.|...||...:.:
  Rat   105 LSPEGRRVALKQFQYYGY------------------NAYLSDRLPLDRPLPDLRPSGCRNLSFPD 151

  Fly   200 DLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYSDHPEDGLELAK-IDKV---- 259
            .|||.|::..|.|||.|.|||:|.|.:.|:|.||::||:||||.|.:.|...:|.: :|||    
  Rat   152 SLPEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLKEIILVDDNSSNEELKEKLTEYVDKVNGQK 216

  Fly   260 ----RVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVVCPVID 320
                :|:|:.|:|||:||||.|..||.:.|:...|:|||.|..|.||:|.|::|:..|::.|..|
  Rat   217 PGFIKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRIISPSFD 281

  Fly   321 VISMDNF---QYIGASADLRGGFDWNLIFKW-EYLSPSERAMRHNDPTTAIRTPMIAGGLFVIDK 381
            .|..|||   :|..|:.    ||||.|   | .||:|.:...:..:.|..||:|.:. |.|::|:
  Rat   282 NIKYDNFEIEEYPLAAQ----GFDWEL---WCRYLNPPKAWWKLENSTAPIRSPALI-GCFIVDR 338

  Fly   382 AYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVFARN 446
            .||.::|..|..|:|:||||:|:..||||||||:|::||||:.|:.|...||| ...:.:| .||
  Rat   339 QYFEEIGLLDEGMEVYGGENVELGIRVWQCGGSVEVLPCSRIAHIERAHKPYT-EDLTAHV-RRN 401

  Fly   447 TRRAAEVWMDDYKQHYYNAVPLAKNIP-------FGNIDDRLALKEKLHCKPFKWYLENVYPDLQ 504
            ..|.||||||::|.|.|    :|.|||       .|:|..|.||:::|.||.|:|||.:|||:::
  Rat   402 ALRVAEVWMDEFKSHVY----MAWNIPQEDSGIDIGDITARKALRKQLQCKTFRWYLVSVYPEMR 462

  Fly   505 APDPQEVGQFRQDSTE---CLDTMGHLIDGTVGIFPCHN-TGGNQEWAFTKRGEI--------KH 557
            ...........|:|.:   |.| .|...:....::.||. |..|..:..:::..:        ..
  Rat   463 MYSDIIAYGVLQNSLKTDLCFD-QGPDTENVPIVYICHGMTPQNVYYTSSQQIHVGVLSPTIDDD 526

  Fly   558 DDLCLTLVTFARGSQVVLKACDDSENQR----WIMREGGLVRHYKINVCLDSRDQSQQGVSAQHC 618
            |:.||..|    .|:..|..|..::.:|    |...:||.:::.|...||:.::.|......|..
  Rat   527 DNRCLVDV----NSRPRLIECSYAKAKRMKLHWQFSQGGSIQNRKSKRCLELQENSDMEFGFQLV 587

  Fly   619 NSALGTQRWS 628
            ......|.|:
  Rat   588 LQKCSGQHWT 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 pp-GalNAc-T 205..500 CDD:133004 135/314 (43%)
beta-trefoil_Ricin_GALNT2 510..629 CDD:467312 27/135 (20%)
Galnt18NP_001073353.1 pp-GalNAc-T 157..458 CDD:133004 135/314 (43%)
beta-trefoil_Ricin_GALNT18 461..602 CDD:467353 27/142 (19%)

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