DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and Pgant4

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster


Alignment Length:551 Identity:195/551 - (35%)
Similarity:285/551 - (51%) Gaps:62/551 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 GGRLPVAPSGRGTEVEYF--NEAGYIRAGALRNG-----EDP---------YIRNRFNQEASDAL 178
            |.||| .|.|...:...:  .||...|:|...:|     |:|         |..|.||...||.:
  Fly    91 GFRLP-EPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIENPDEKQLEKEHYEMNGFNGLISDRI 154

  Fly   179 PSNRDIPDTRNPMCRTKKYREDLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDY 243
            ..||.:||.|...|:|:||...||..|||..|.||..:||||:|.||:||:|..|:::||||||.
  Fly   155 SVNRSVPDLRLEACKTRKYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDG 219

  Fly   244 SD-----HP-EDGLELAKIDKVRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEP 302
            |:     .| :|.::......|.::||.:|:||:.:|:.||..||..|:.|.|||:|.|..||.|
  Fly   220 SEWDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPP 284

  Fly   303 LLERVREDPTRVVCPVIDVISMDNFQYIGASAD-LRGGFDWNLIFKWEYLSPSERAMRHNDPTTA 366
            |:|.:..:|....||::|.||.::|.|...:.| .||||||.:::|...:.|.:..    |.:..
  Fly   285 LIEPIAINPKISTCPMVDTISHEDFSYFSGNKDGARGGFDWKMLYKQLPVLPEDAL----DKSMP 345

  Fly   367 IRTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFR-KR 430
            .|:|::.||||.|:..:|..||.||.::|:||||..|:||::|.|||.|..:|||||.|:|| ..
  Fly   346 YRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIFRGPM 410

  Fly   431 HPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLA-KNIPFGNIDDRLALKEKLHCKPFKW 494
            .|...|.|. |..|:|.:|.||||||:|||:.|...|.. .|:..|::..:..::|:|.||.|.|
  Fly   411 KPRGNPRGH-NFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDAGDLTRQRGVRERLKCKSFHW 474

  Fly   495 YLENVYPDLQAPDP------------QEVGQFRQDSTECLDTMGHLIDGTVGIFPCHNT----GG 543
            ::..|.||.....|            |.|.    :...|||.||...:..||:|.|.:.    ..
  Fly   475 FMTEVAPDFLVKFPPVEPPSYAAGIIQNVA----NPVYCLDNMGKSTEEAVGMFSCADNRTHPQP 535

  Fly   544 NQEWAFTKRGEIK---HDDLCLTLVTFARGSQVVLKAC-DDSENQRWIM-REGGLVRHYKINV-C 602
            ||.|..:...:::   .|.:||.:......:.|.:.:| ....||.|.. |:...:.|.:.|. |
  Fly   536 NQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGENNKRC 600

  Fly   603 LDSRDQSQQGVS---AQHCNSALGTQRWSFG 630
            |:.  ..:.|::   |..|.:....|||.||
  Fly   601 LEG--FVENGIAKVVANSCENGNDRQRWEFG 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 102/239 (43%)
pp-GalNAc-T 205..500 CDD:133004 126/303 (42%)
Ricin_B_lectin 511..627 CDD:279046 30/128 (23%)
RICIN 513..629 CDD:238092 31/128 (24%)
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 101/237 (43%)
pp-GalNAc-T 181..480 CDD:133004 126/303 (42%)
Ricin_B_lectin 496..626 CDD:279046 31/135 (23%)
RICIN 498..628 CDD:238092 33/135 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457050
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60373at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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