DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant2 and gly-4

DIOPT Version :10

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001024216.1 Gene:gly-4 / 180302 WormBaseID:WBGene00001629 Length:589 Species:Caenorhabditis elegans


Alignment Length:500 Identity:268/500 - (53%)
Similarity:333/500 - (66%) Gaps:25/500 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 FNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRNPMCRTKKY-REDLPETSVIITF 210
            |:...::..|....|||.|..|.|||||||||...|.|||:|.|.||...| :..:..|:||||:
 Worm    95 FDVEKFLNKGKWHQGEDKYKANSFNQEASDALNPTRKIPDSREPQCRDVDYSKVGMQPTTVIITY 159

  Fly   211 HNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYSDHPEDGLELAKIDKVRVIRNDKREGLVRSRV 275
            ||||||:||||:.||.|:|||.|:.|||||||.|...|.|.|||:|.::.|:||::||||:||||
 Worm   160 HNEARSSLLRTVFSVFNQSPEELLLEIVLVDDNSQDVEIGKELAQIQRITVLRNNQREGLIRSRV 224

  Fly   276 KGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVVCPVIDVISMDNFQYIGASADLRGGF 340
            |||..|.:.||||||||:|||:.||||||.|:.|:|..||.|:||||::|||.|:||||||||||
 Worm   225 KGAQVARAPVLTFLDSHIECNQKWLEPLLARIAENPKAVVAPIIDVINVDNFNYVGASADLRGGF 289

  Fly   341 DWNLIFKWEYLSPSERAMRHNDPTTAIRTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEIS 405
            ||.|:|:||:::...|..||..||..||:|.:|||||.|.|.:||:||.||:.|:||||||||:|
 Worm   290 DWTLVFRWEFMNEQLRKERHAHPTAPIRSPTMAGGLFAISKEWFNELGTYDLDMEVWGGENLEMS 354

  Fly   406 FRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAK 470
            ||||||||||||:|||||||||||:|||||||||||||.:|||||||||||:||..|...||.|:
 Worm   355 FRVWQCGGSLEIMPCSRVGHVFRKKHPYTFPGGSGNVFQKNTRRAAEVWMDEYKAIYLKNVPSAR 419

  Fly   471 NIPFGNIDDRLALKEKLHCKPFKWYLENVYPDLQAPDPQEVGQFRQD-STECLDTMGHLIDGTVG 534
            .:.||:|.||||::::|.||.||||||||||.|:.|.......|:.. ...|||:|........|
 Worm   420 FVNFGDITDRLAIRDRLQCKSFKWYLENVYPQLEIPRKTPGKSFQMKIGNLCLDSMARKESEAPG 484

  Fly   535 IFPCHNTGGNQEWAF---TKRGEIKHDDLCLTLVTFARGSQVVLKACDD-------SENQRWIMR 589
            :|.||.|||||||.|   ||..:.....|||...:......|.:..|::       .|...|:.:
 Worm   485 LFGCHGTGGNQEWVFDQLTKTFKNAISQLCLDFSSNTENKTVTMVKCENLRPDTMVVEKNGWLTQ 549

  Fly   590 EGGLVRHYKINVCLDSRDQSQQG---VSAQHCNSALGTQRWSFGK 631
            .|         .|| :.:|...|   :...||....|.|||.|.|
 Worm   550 GG---------KCL-TVNQGSGGDWLIYGAHCELNNGAQRWIFEK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 pp-GalNAc-T 205..500 CDD:133004 198/294 (67%)
beta-trefoil_Ricin_GALNT2 510..629 CDD:467312 37/132 (28%)
gly-4NP_001024216.1 pp-GalNAc-T 154..449 CDD:133004 198/294 (67%)
beta-trefoil_Ricin_GALNT2 461..582 CDD:467312 37/130 (28%)

Return to query results.
Submit another query.