DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and gly-4

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001024216.1 Gene:gly-4 / 180302 WormBaseID:WBGene00001629 Length:589 Species:Caenorhabditis elegans


Alignment Length:500 Identity:268/500 - (53%)
Similarity:333/500 - (66%) Gaps:25/500 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 FNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRNPMCRTKKY-REDLPETSVIITF 210
            |:...::..|....|||.|..|.|||||||||...|.|||:|.|.||...| :..:..|:||||:
 Worm    95 FDVEKFLNKGKWHQGEDKYKANSFNQEASDALNPTRKIPDSREPQCRDVDYSKVGMQPTTVIITY 159

  Fly   211 HNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYSDHPEDGLELAKIDKVRVIRNDKREGLVRSRV 275
            ||||||:||||:.||.|:|||.|:.|||||||.|...|.|.|||:|.::.|:||::||||:||||
 Worm   160 HNEARSSLLRTVFSVFNQSPEELLLEIVLVDDNSQDVEIGKELAQIQRITVLRNNQREGLIRSRV 224

  Fly   276 KGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVVCPVIDVISMDNFQYIGASADLRGGF 340
            |||..|.:.||||||||:|||:.||||||.|:.|:|..||.|:||||::|||.|:||||||||||
 Worm   225 KGAQVARAPVLTFLDSHIECNQKWLEPLLARIAENPKAVVAPIIDVINVDNFNYVGASADLRGGF 289

  Fly   341 DWNLIFKWEYLSPSERAMRHNDPTTAIRTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEIS 405
            ||.|:|:||:::...|..||..||..||:|.:|||||.|.|.:||:||.||:.|:||||||||:|
 Worm   290 DWTLVFRWEFMNEQLRKERHAHPTAPIRSPTMAGGLFAISKEWFNELGTYDLDMEVWGGENLEMS 354

  Fly   406 FRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAK 470
            ||||||||||||:|||||||||||:|||||||||||||.:|||||||||||:||..|...||.|:
 Worm   355 FRVWQCGGSLEIMPCSRVGHVFRKKHPYTFPGGSGNVFQKNTRRAAEVWMDEYKAIYLKNVPSAR 419

  Fly   471 NIPFGNIDDRLALKEKLHCKPFKWYLENVYPDLQAPDPQEVGQFRQD-STECLDTMGHLIDGTVG 534
            .:.||:|.||||::::|.||.||||||||||.|:.|.......|:.. ...|||:|........|
 Worm   420 FVNFGDITDRLAIRDRLQCKSFKWYLENVYPQLEIPRKTPGKSFQMKIGNLCLDSMARKESEAPG 484

  Fly   535 IFPCHNTGGNQEWAF---TKRGEIKHDDLCLTLVTFARGSQVVLKACDD-------SENQRWIMR 589
            :|.||.|||||||.|   ||..:.....|||...:......|.:..|::       .|...|:.:
 Worm   485 LFGCHGTGGNQEWVFDQLTKTFKNAISQLCLDFSSNTENKTVTMVKCENLRPDTMVVEKNGWLTQ 549

  Fly   590 EGGLVRHYKINVCLDSRDQSQQG---VSAQHCNSALGTQRWSFGK 631
            .|         .|| :.:|...|   :...||....|.|||.|.|
 Worm   550 GG---------KCL-TVNQGSGGDWLIYGAHCELNNGAQRWIFEK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 152/231 (66%)
pp-GalNAc-T 205..500 CDD:133004 198/294 (67%)
Ricin_B_lectin 511..627 CDD:279046 35/129 (27%)
RICIN 513..629 CDD:238092 37/129 (29%)
gly-4NP_001024216.1 pp-GalNAc-T 154..449 CDD:133004 198/294 (67%)
RICIN 469..582 CDD:238092 36/122 (30%)
Ricin_B_lectin 469..580 CDD:279046 34/120 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164165
Domainoid 1 1.000 235 1.000 Domainoid score I1328
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3297
Inparanoid 1 1.050 532 1.000 Inparanoid score I658
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48823
OrthoDB 1 1.010 - - D351893at33208
OrthoFinder 1 1.000 - - FOG0001204
OrthoInspector 1 1.000 - - oto20745
orthoMCL 1 0.900 - - OOG6_106909
Panther 1 1.100 - - LDO PTHR11675
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3059
SonicParanoid 1 1.000 - - X2085
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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