DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and Galnt10

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_038941033.1 Gene:Galnt10 / 170501 RGDID:69409 Length:752 Species:Rattus norvegicus


Alignment Length:531 Identity:206/531 - (38%)
Similarity:288/531 - (54%) Gaps:55/531 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GTGGPGGRLPVAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRN 189
            |.|..|...|:      |:.|..::|              |..|.||...||.:..||.:||.|:
  Rat   237 GNGEQGKPYPM------TDAERVDQA--------------YRENGFNIYVSDKISLNRSLPDIRH 281

  Fly   190 PMCRTKKYREDLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYSD--HPEDGLE 252
            |.|.:|.|.|.||.||:||.||||..|:||||:.|||||||..|:.|||||||:||  |.:..||
  Rat   282 PNCNSKLYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLE 346

  Fly   253 --LAKIDKVRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVV 315
              :|....||::|..|||||:|:|:.||.||...|:||||||.|.|..||.|||:|:..:...:|
  Rat   347 DYMALFPSVRILRTKKREGLIRTRMLGASAATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIV 411

  Fly   316 CPVIDVISMDNFQYIGASAD-LRGGFDWNLIFKWEYLSPSERAMRHNDPTTAIRTPMIAGGLFVI 379
            ||:||||..|:|:|...:.| :||.|||.:.:|...:.|.   ::..||:....:|::|||||.:
  Rat   412 CPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPE---LQKADPSDPFESPVMAGGLFAV 473

  Fly   380 DKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVFA 444
            |:.:|.:||.||..:::||||..||||:||.|||.:|.||||||||::||..||..|.|..  .|
  Rat   474 DRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVS--LA 536

  Fly   445 RNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNIDDRLALKEKLHCKPFKWYLENV-------YPD 502
            ||.:|.||||||:|.::.|...|..:::..|::..:..|:..|:||.|||::..:       ||.
  Rat   537 RNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVVAQKKLRGSLNCKSFKWFMTKIAWDLPKFYPP 601

  Fly   503 LQAPDPQEVGQFRQDSTE-CLDTMGHLIDGTVGIFPCHNTGGNQEW------AFTKRGEIKHDD- 559
            :: |.....|:.|...|. |.||....:...:.:..|....|...|      .||.|.:|:..| 
  Rat   602 VE-PPAAAWGEIRNVGTGLCTDTKHGTLGSPLRLETCIRGRGEAAWNSMQVFTFTWREDIRPGDP 665

  Fly   560 -----LCLTLVTFARGSQVVLKACDDSE-NQRWIMREGGLVRHYKINVCLDSRDQSQQGVSAQHC 618
                 .|...|:..  |.|.|..|...: ||.|..|:...:.|.....|:|. .:|...:....|
  Rat   666 QHTKKFCFDAVSHT--SPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDC-SESDHRIFMNTC 727

  Fly   619 NSALGTQRWSF 629
            |.:..||:|.|
  Rat   728 NPSSLTQQWLF 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 121/236 (51%)
pp-GalNAc-T 205..500 CDD:133004 143/306 (47%)
Ricin_B_lectin 511..627 CDD:279046 32/129 (25%)
RICIN 513..629 CDD:238092 32/129 (25%)
Galnt10XP_038941033.1 pp-GalNAc-T 297..592 CDD:133004 143/299 (48%)
Ricin_B_lectin 608..736 CDD:395527 32/130 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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