DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and Galnt8

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_038965005.1 Gene:Galnt8 / 103690194 RGDID:9174049 Length:583 Species:Rattus norvegicus


Alignment Length:596 Identity:114/596 - (19%)
Similarity:172/596 - (28%) Gaps:281/596 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 RNGEDPYIRNRFNQEASDALPSNRDIPDTRNPMCRTKKYREDLPETSVIITFHNEARSTLLR--- 220
            |..:|.::....:...|:.:|.|..||||.|..|..       |:.|:::.|.:.|:..:.|   
  Rat    43 REAQDLFLEFGCSVFLSNQMPYNGSIPDTHNARCTG-------PQCSLVMNFGSHAKERVDRGLS 100

  Fly   221 ---------------------------------TIVS--------------------VLNR---- 228
                                             :.||                    ::.|    
  Rat   101 YISSCIACTEEVLSWNANIREAQQLCSLPAMFLSFVSAYRIPCHAALCNLGPWEAPPIIERRHHQ 165

  Fly   229 ----SPEHLIREIVLVDDYSDHPED---------------------------GLELA-------- 254
                :|..|:: |:||||.|.|.||                           |..||        
  Rat   166 HHQPTPPQLLK-IILVDDISSHGEDPEGRRRSFQYPKKKLSEIYDGDPRMSWGKALAYAICTLSQ 229

  Fly   255 --------------------------------------------KIDKVRV------------IR 263
                                                        |.:|.:|            ||
  Rat   230 RSGAACRTVASPTGQCRTVYNFCIASIFLHAGLCWGGVWLGGELKDEKFQVYNQNYPILLRCLIR 294

  Fly   264 NDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLE-----PLLE---RVREDP--------- 311
            :.||.||......|.:||.:.|:..||:.|:.|..|.:     ..:|   |.||.|         
  Rat   295 HTKRRGLAHDPNTGLEAATADVVAILDAPVDVNIGWTQNKDYMDSVESHARERETPFGNMDNFLP 359

  Fly   312 ----------TRVV-----------------------CPVIDVISMDNFQYIGASADLRGGFDWN 343
                      .|::                       .||.|.|:.|.|: :...|....||.|.
  Rat   360 SLSKNGLHMTVRLIRASLSAPAHCGATVGLTVLSSFRAPVSDDINFDTFE-LKKDALAADGFVWK 423

  Fly   344 LIFKWEYLSPSERA-MRHNDPTTAIRTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFR 407
            |   |.:..||.|| :...|.:..||:|... |:...::.:..::|..|..|.:.||:|:.:..|
  Rat   424 L---WYHYDPSPRAWIDLGDASVPIRSPSFV-GIVATNRIFLEEIGALDGGMLLCGGQNVGLGLR 484

  Fly   408 VWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNI 472
            .       |..|.|            .:....|:|     .:|..:|..                
  Rat   485 G-------EYFPSS------------LWVKAEGDV-----TKALRIWES---------------- 509

  Fly   473 PFGNIDDRLALKEKLHCKPFKWYLENVYPDLQAPDPQEVGQFRQDSTECLD---------TMGHL 528
             :.....|..|.|||.||.|.|||:.|..:            ..|.:.|||         .|...
  Rat   510 -YSTFASRKELWEKLKCKTFDWYLKIVMKN------------SLDGSVCLDGGPAPGNSPRMEPC 561

  Fly   529 IDGTVGIFPCH 539
            .|.||.:.|.|
  Rat   562 HDFTVQVSPSH 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 77/437 (18%)
pp-GalNAc-T 205..500 CDD:133004 91/500 (18%)
Ricin_B_lectin 511..627 CDD:279046 10/38 (26%)
RICIN 513..629 CDD:238092 10/36 (28%)
Galnt8XP_038965005.1 Glyco_tranf_GTA_type 272..535 CDD:416254 70/308 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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