DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and galnt6.3

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_004911960.1 Gene:galnt6.3 / 100498043 XenbaseID:XB-GENE-22063205 Length:622 Species:Xenopus tropicalis


Alignment Length:602 Identity:240/602 - (39%)
Similarity:330/602 - (54%) Gaps:64/602 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 GSGA-DDPGGNVILI--GSVKDFERNAVHGL-----KLNGIVALEETSQGLSGGTGGPG------ 130
            |:|| |||....|::  ..:.|..|.|::.|     ||..:..::|...........||      
 Frog    32 GNGAKDDPWIKNIVVRKDQMLDMMRGAMNNLKDSIPKLQIMAPVQEEGPVEEKKLCLPGYYTPAE 96

  Fly   131 -----GRLPVAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDI-PDTRN 189
                 .|.|..|:..|.:.:.|.:..:... ..:..|..:.::.||..|||.:..:|.: ||||.
 Frog    97 LKPFMERPPQDPNSPGADGKGFKKDTWTEE-ETKEKEKGFDKHCFNAFASDRISLHRALGPDTRP 160

  Fly   190 PMCRTKKYRE--DLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYSDHPEDGLE 252
            |:|..:|::.  .||.|||||.|||||.||||||:.|||..||..|::||:||||.|   ||...
 Frog   161 PVCIEQKFKRCPSLPTTSVIIVFHNEAWSTLLRTVYSVLYTSPAILLKEIILVDDAS---EDEYL 222

  Fly   253 LAKIDK-------VRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVRED 310
            ..|:|.       |::.|..:|:||:.:|:.||..|...||||||:|.||...||||||.|:.||
 Frog   223 KEKLDDYVKALQIVKIARQKERKGLITARLLGASIATGEVLTFLDAHCECFHGWLEPLLSRIAED 287

  Fly   311 PTRVVCPVIDVISMDNFQYIG----ASADLRGGFDWNLIFKWEYLSPSERAMRHNDPTTAIRTPM 371
            .|.||.|.|..|.:::|::..    .....||.|||:|.|.||.:..:|:. |..|.|..|::|.
 Frog   288 HTAVVSPDITTIDLNSFEFAKPVQYGKTHSRGNFDWSLTFGWEAIPAAEKE-RRKDETYPIKSPT 351

  Fly   372 IAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTFP 436
            .|||||.|.||||..:|.||.:|::|||||:|:|||||||||.|||||||.||||||.:.|:|||
 Frog   352 FAGGLFSISKAYFEHIGSYDEEMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFP 416

  Fly   437 GGSGNVFARNTRRAAEVWMDDYKQHYY----NAVPLAKNIPFGNIDDRLALKEKLHCKPFKWYLE 497
            .|: .|.:||..|.|||||||||..||    .|..:.:...||:|..||.||..|.||.|.||||
 Frog   417 KGT-QVISRNQVRLAEVWMDDYKLIYYRRNEQAAKMVREKSFGDISKRLKLKADLQCKNFTWYLE 480

  Fly   498 NVYPDLQAP--DPQEVGQFRQD-STECLDTMGHLIDG--TVGIFPCHNTGGNQEWAFTKRGEIKH 557
            |:||::..|  ||...|..:.: |..||| :|....|  .:.::|||..||||.:.::...|::|
 Frog   481 NIYPEMFVPDRDPTYYGAVKNEGSQNCLD-VGENNHGGKPLIMYPCHGMGGNQYFEYSTHKELRH 544

  Fly   558 D---DLCLTLVTFARGSQVVLKACDDS-------ENQRWIMREGGLVRHYKINVCLDSRDQSQQG 612
            :   .|||. ..:..| .|.|..|...       .|:.|.:.:..|:::...|:||.:|.::.  
 Frog   545 NIAKQLCLR-SKYGPG-PVELGECQYKGKKTTVPGNEEWELTKDRLLKNVGSNMCLTARGENP-- 605

  Fly   613 VSAQHCNSALGTQRWSF 629
             |...||.:...|||.|
 Frog   606 -STAECNPSDIHQRWGF 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 126/242 (52%)
pp-GalNAc-T 205..500 CDD:133004 160/309 (52%)
Ricin_B_lectin 511..627 CDD:279046 34/128 (27%)
RICIN 513..629 CDD:238092 35/128 (27%)
galnt6.3XP_004911960.1 pp-GalNAc-T 178..483 CDD:133004 160/309 (52%)
Ricin_B_lectin 496..619 CDD:366226 34/128 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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