DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and galnt6.1

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_002933739.1 Gene:galnt6.1 / 100497888 XenbaseID:XB-GENE-983702 Length:622 Species:Xenopus tropicalis


Alignment Length:613 Identity:240/613 - (39%)
Similarity:329/613 - (53%) Gaps:84/613 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 AGSGA-DDPGGNVILI--GSVKDFERNAVHGLK-----LNGIVALEETSQGLSGGTGGP------ 129
            ||:|| |||....|::  ..:.|..|.|::.|.     |..:..::|.         ||      
 Frog    31 AGNGAKDDPWIKNIVVRKDQMLDMMRGAMNNLNDFIPDLQIMAPVQEE---------GPVEEKKS 86

  Fly   130 --------------GGRLPVAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPS 180
                          ..|.|..|:..|.:.:.|.:..:... ..:..|..:.::.||..|||.:..
 Frog    87 CLPEYYTPAELKPFMERPPQDPNSPGADGKEFKKDTWTEE-ETKEKEKGFDKHHFNAFASDRISL 150

  Fly   181 NRDI-PDTRNPMCRTKKYRE--DLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDD 242
            :|.: ||||.|:|..:|::.  .||.|||||.|||||.||||||:.|||..||..|::||:||||
 Frog   151 HRALGPDTRPPVCIEQKFKRCPSLPTTSVIIVFHNEAWSTLLRTVYSVLYTSPAILLKEIILVDD 215

  Fly   243 YSDHPEDGLELAKIDK-------VRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWL 300
            .|   ||.....|:|.       |::.|..:|:||..:|:.||..|...||||||:|.||...||
 Frog   216 AS---EDEYLKEKLDDYVKALQIVKIARQKERKGLTTARLLGASIATGEVLTFLDAHCECFHGWL 277

  Fly   301 EPLLERVREDPTRVVCPVIDVISMDNFQY-----IGASADLRGGFDWNLIFKWEYLSPSERAMRH 360
            ||||.|:.||.|.||.|.|.:|.:::|::     .|.:.: ||.|||:|.|.||.:..:|:. |.
 Frog   278 EPLLSRIAEDHTAVVSPDIPIIDLNSFEFHKPVQYGKTHN-RGNFDWSLTFGWEAIPAAEKE-RR 340

  Fly   361 NDPTTAIRTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGH 425
            .|.|..|:||..|||||.|.||||..:|.||.:|::|||||||:|||||||||.|||||||.|||
 Frog   341 KDETYPIKTPTFAGGLFSISKAYFEHIGSYDEEMEIWGGENLEMSFRVWQCGGQLEIIPCSVVGH 405

  Fly   426 VFRKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYY----NAVPLAKNIPFGNIDDRLALKEK 486
            |||.:.|:|||.|:..:| ||..|.|||||||||..||    .|..:.:...||:|..||.||..
 Frog   406 VFRTKSPHTFPKGTQVIF-RNLVRLAEVWMDDYKLLYYQRNEQAAKMVREKSFGDISKRLKLKAD 469

  Fly   487 LHCKPFKWYLENVYPDLQAP--DPQEVGQFRQD-STECLDTMGHLIDGTVGIFP--CHNTGGNQE 546
            |.||.|.|||||:||::..|  ||...|:.:.: |..|||. |....|...:..  |:..||.|.
 Frog   470 LQCKNFTWYLENIYPEMFVPDRDPTYYGKVKNEGSQNCLDA-GEKNHGGKPLIMNLCNGMGGTQY 533

  Fly   547 WAFTKRGEIKHD---DLCLTLVTFARGSQVVLKACDDS-------ENQRWIMREGGLVRHYKINV 601
            :.::...|::|:   .|||. ..:..| .|.|..|...       .|:.|.:.:..|:::...|:
 Frog   534 FEYSTHKELRHNIAKQLCLR-SKYVPG-PVELGECQYKGKRTTVPGNEEWELTKDRLLKNVGSNM 596

  Fly   602 CLDSRDQSQQGVSAQHCNSALGTQRWSF 629
            ||.:|.::.   |...||.:...|||.|
 Frog   597 CLTARGENP---STAECNPSDIHQRWGF 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 129/243 (53%)
pp-GalNAc-T 205..500 CDD:133004 163/310 (53%)
Ricin_B_lectin 511..627 CDD:279046 31/128 (24%)
RICIN 513..629 CDD:238092 32/128 (25%)
galnt6.1XP_002933739.1 pp-GalNAc-T 178..483 CDD:133004 163/310 (53%)
Ricin_B_lectin 496..619 CDD:366226 31/128 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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