DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and Galnt6

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001165534.1 Gene:Galnt6 / 100361647 RGDID:2319726 Length:622 Species:Rattus norvegicus


Alignment Length:536 Identity:229/536 - (42%)
Similarity:316/536 - (58%) Gaps:57/536 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 RLPVAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDI-PDTRNPMCRTK 195
            |.|..|:..|.:.:.|.:..:... ..:..::.|.::.||..|||.:...|.: ||||.|.|..:
  Rat   105 RPPQDPNSPGADGKAFQKKEWTLL-ETQEKDEGYKKHCFNAFASDRISLQRSLGPDTRPPECVDQ 168

  Fly   196 KYRE--DLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYS--DHPEDGLE--LA 254
            |:|.  .||.|||:|.|||||.||||||:.|||:.||..|::||:||||.|  :|.::.||  :.
  Rat   169 KFRRCPPLPTTSVVIVFHNEAWSTLLRTVYSVLHTSPAILLKEIILVDDASTDEHLKEKLERYVQ 233

  Fly   255 KIDKVRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVVCPVI 319
            ::..|||:|..:|:||:.:|:.||..|.:.||||||:|.||...||||||.|:.||.|.||.|.|
  Rat   234 QLQIVRVVRQQERKGLITARLLGASVAQAEVLTFLDAHCECFHGWLEPLLARIAEDKTAVVSPDI 298

  Fly   320 DVISMDNFQYI----GASADLRGGFDWNLIFKWEYLSPSERAMRHNDPTTAIRTPMIAGGLFVID 380
            ..|.::.||:.    ...|..||.|||:|.|.||.| |.....|..|.|..|::|..|||||.|.
  Rat   299 VTIDLNTFQFSKPMRRGKAHSRGNFDWSLTFGWEML-PEHEKQRRKDETYPIKSPTFAGGLFSIS 362

  Fly   381 KAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVFAR 445
            ||||..:|.||.:|::|||||:|:|||||||||.|||||||.||||||.:.|:|||.|: :|.||
  Rat   363 KAYFEHIGTYDNQMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFPKGT-SVIAR 426

  Fly   446 NTRRAAEVWMDDYKQHYY----NAVPLAKNIPFGNIDDRLALKEKLHCKPFKWYLENVYPDLQAP 506
            |..|.|||||||||:.:|    .|..:||...||::.:||.|:|:|||..|.|||.||||::..|
  Rat   427 NQVRLAEVWMDDYKKIFYRRNLQAAKMAKENNFGDVSERLRLREQLHCHNFSWYLHNVYPEMFVP 491

  Fly   507 D--PQEVGQFRQ-DSTECLDTMGHLIDGTVG----------IFPCHNTGGNQEWAFTKRGEIKHD 558
            |  |...|..:. .:::|||         ||          ::.|||.||||.:.:|.:.:::|:
  Rat   492 DLNPTFSGAIKNLGTSQCLD---------VGENNRGGKPLIMYVCHNLGGNQYFEYTSQRDLRHN 547

  Fly   559 ---DLCLTLVTFARGSQVVLKACD----DSE---NQRWIMREGGLVRHYKINVCLDSRDQSQQGV 613
               .|||    .|.||.:.|:.|.    :||   ::.|.:.:..|:|:.....||.|:|:..   
  Rat   548 IGKQLCL----HASGSTLGLRNCQFIGKNSEVPKDEEWELTQDQLIRNLGSGTCLTSKDKKP--- 605

  Fly   614 SAQHCNSALGTQRWSF 629
            :...||.:...|.|.|
  Rat   606 AMAPCNPSDPYQLWLF 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 129/239 (54%)
pp-GalNAc-T 205..500 CDD:133004 163/306 (53%)
Ricin_B_lectin 511..627 CDD:279046 35/136 (26%)
RICIN 513..629 CDD:238092 35/136 (26%)
Galnt6NP_001165534.1 pp-GalNAc-T 180..485 CDD:133004 163/306 (53%)
Ricin_B_lectin 497..619 CDD:395527 35/137 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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