DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant2 and galnt5

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_002667267.4 Gene:galnt5 / 100334784 -ID:- Length:768 Species:Danio rerio


Alignment Length:638 Identity:212/638 - (33%)
Similarity:315/638 - (49%) Gaps:115/638 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EKVENRALRLREVATAMQQYQDDSSSAAAASTARQWAPAGGGAGPGAAAGAAGSGADDPGGNVIL 92
            ||:||.....::.|...::.:.|.:...:..||:                       ||....:.
Zfish   211 EKLENNTDSRKKHAGTFKKTKSDITRKPSKPTAQ-----------------------DPAEEALR 252

  Fly    93 IGSVKDFERNAVHGLKLNGIVALEETSQGL---SGGTGGPGGRLPVAPSGRGTEVEYFNEAGYIR 154
            :......:|:..|    :.:.||:.|.:..   :.|..|...|:|     :..|:|         
Zfish   253 VLPSTSVKRSGGH----HKVKALDVTDRPRDPHAVGQFGQPARVP-----KNEELE--------- 299

  Fly   155 AGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRNPMCRTKKYREDLPETSVIITFHNEARSTLL 219
              :.|...:.:    ||...|:.:|.:|.|||||...|......:|||.||||..|.:|..||||
Zfish   300 --SRRRWSEGF----FNVFLSEQIPIDRAIPDTRPQTCSESLVHDDLPSTSVIFCFVDEVWSTLL 358

  Fly   220 RTIVSVLNRSPEHLIREIVLVDDYS--DHPEDGLE--LAKIDKVRVIRNDKREGLVRSRVKGADA 280
            |::.|||||||..|::||:||||.|  |:.::.|:  :::..|||:|...:|:||:|:|:.||.|
Zfish   359 RSVHSVLNRSPPQLLKEIILVDDCSTKDYLKEQLDVYMSQFPKVRIIHLKERQGLIRARMAGAAA 423

  Fly   281 AVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVVCPVIDVIS--------MDNFQYIGASADLR 337
            |...||||||||:|||..||||||||:..|..:|.|||||||:        :||||        |
Zfish   424 ATGEVLTFLDSHIECNVGWLEPLLERIYLDRRKVPCPVIDVINDKDMSYMLVDNFQ--------R 480

  Fly   338 GGFDWNLIFKW-----EYLSPSERAMRHNDPTTAIRTPMIAGGLFVIDKAYFNKLGKYDMKMDVW 397
            |.|.|.|:|.|     ||:..::  ::.:||   ||...    .|:......|...|        
Zfish   481 GIFKWPLVFGWSALPEEYIQKNQ--IKDSDP---IRIAC----CFIHSHILHNNRKK-------- 528

  Fly   398 GGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQ-- 460
            .|......|::|.|||.:||||||||||:||..:||.|.........||..|.||||:|:||:  
Zfish   529 SGNVFLFVFQIWMCGGEIEIIPCSRVGHIFRSDNPYKFTKDRVKTVERNLARVAEVWLDEYKEVF 593

  Fly   461 --HYYNAVPLAKNI-PFGNIDDRLALKEKLHCKPFKWYLENVYPDLQAPDPQEVGQ-FRQDSTEC 521
              |.|..: |.||: ..||:.:::.|:|||.||.||||||||||||..|..:..|. |...:.:|
Zfish   594 YGHGYQHL-LDKNVTDIGNLTEQIQLREKLKCKSFKWYLENVYPDLDTPVVKAEGLIFNVGTRKC 657

  Fly   522 LDTMGHLIDGTVGIFPCHNTGGNQEWAFTKRGEIKHDDLCLTLVTFARGSQVVLKACDDSE-NQR 585
            |.....    :..:..|..|..:|.:.||....::.:..||.    .:.:|:.::.||::: :.|
Zfish   658 LIFQNE----SFSLTKCDLTNKSQYFTFTWLRLLRQNTSCLA----PQETQLTMEPCDNTKPHLR 714

  Fly   586 WIMREG-GLVRH-----YKINVCLDSRDQSQQGVSAQHCNSALGTQRWSFGKY 632
            ||.:.| .|..|     |...:||::..:: .||..:.|:.....|:|.|..|
Zfish   715 WIHKSGKALTEHLMAEVYSQPICLEAGIKA-DGVFLKGCDRFSTFQKWQFTHY 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 110/248 (44%)
pp-GalNAc-T 205..500 CDD:133004 139/316 (44%)
Ricin_B_lectin 511..627 CDD:279046 27/123 (22%)
RICIN 513..629 CDD:238092 27/123 (22%)
galnt5XP_002667267.4 Glyco_tranf_GTA_type 344..635 CDD:325014 139/316 (44%)
Ricin_B_lectin 647..761 CDD:306998 27/122 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.