DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and galnt13

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_005168002.1 Gene:galnt13 / 100330695 ZFINID:ZDB-GENE-091204-444 Length:581 Species:Danio rerio


Alignment Length:656 Identity:248/656 - (37%)
Similarity:331/656 - (50%) Gaps:162/656 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRRNI--KLIVFVSIIWMFVMVY---YFQSSTEKVENRALRLREVATAMQQYQDDSSSAAAASTA 60
            |||.:  |:::..|::|:.|.|:   || |...|.:||                           
Zfish     1 MRRFVYCKVVLTTSLVWVLVDVFLLLYF-SECNKCDNR--------------------------- 37

  Fly    61 RQWAPAGGGAGPGAAAGAAGSGADDPGGNVILIGSVKDFERNAVHGLKLNGIVALEETSQGLSGG 125
                                                ||      |.|    :.||...   :|..
Zfish    38 ------------------------------------KD------HSL----LPALRAV---MSRA 53

  Fly   126 TGGPG--GRLPVAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTR 188
            ...||  |:..|.|.   .|.:...|...|              |:||..|||.:..||.:||.|
Zfish    54 HEAPGEMGKAVVIPK---EEQDKMKELFKI--------------NQFNLMASDMIALNRSLPDVR 101

  Fly   189 NPMCRTKKYREDLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYS--DHPEDGL 251
            ...|:||.|.:|||.||::|.|||||.||||||:.|.:||||..|:.||:||||.|  |..::.|
Zfish   102 LDGCKTKTYPDDLPNTSIVIVFHNEAWSTLLRTVHSAINRSPRQLLYEILLVDDASERDFLKEKL 166

  Fly   252 E--LAKID-KVRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTR 313
            |  :|.:: .||::|.::|.||:|:|::||.|....|:||||:|.||...|||||:.|::||...
Zfish   167 EDYVATLEVPVRILRMEQRTGLIRARLRGAAATRGQVITFLDAHCECTTGWLEPLMARIKEDRRA 231

  Fly   314 VVCPVIDVISMDNFQYIGASADLRGGFDWNLIFKWEYLSPSERAMRHNDPTTAIRTPMIAGGLFV 378
            ||||:|||||.:.|:|:..|....|||:|.|.|:|..:...|...|..|.|..:|||.:|||||.
Zfish   232 VVCPIIDVISDETFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFS 296

  Fly   379 IDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVF 443
            ||:.||.::|.||..||:|||||||:|||:|||||||||:.||.|||||||..||:||||:|.|.
Zfish   297 IDRTYFEEIGTYDSGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYSFPGGTGQVI 361

  Fly   444 ARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNIDDRLALKEKLHCKPFKWYLENVYPDLQAPDP 508
            .:|.||.||||||::|..:|...|....:.:|::..|.||:|.|.||||.|||||||||.|.|..
Zfish   362 NKNNRRLAEVWMDEFKDFFYIISPGVVRVDYGDVSSRKALRESLKCKPFSWYLENVYPDSQIPRR 426

  Fly   509 -QEVGQFRQ-DSTECLDTMGHLIDGTVGIFPCHNTGGNQEWAFTKRGEIKHDDLCLTLVTFARGS 571
             ..:|:.|. ::.:|:|.||...:..||.|.||..||||.:::|...||:.|||||. .:...|.
Zfish   427 YYSLGEIRNVETNQCVDNMGRKENEKVGFFNCHGMGGNQVFSYTADKEIRTDDLCLD-ASRLNGP 490

  Fly   572 QVVLKA-----------------------------------------------------CDDSEN 583
            .|:||.                                                     ||||..
Zfish   491 VVMLKCHHMKGNQMFEYDAEYVGKWEYDFKKRTFLHIITQSCLTISRLEDGTYGPTVEYCDDSPL 555

  Fly   584 QRWIMR 589
            |.|.:|
Zfish   556 QAWTLR 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 129/236 (55%)
pp-GalNAc-T 205..500 CDD:133004 160/299 (54%)
Ricin_B_lectin 511..627 CDD:279046 34/133 (26%)
RICIN 513..629 CDD:238092 33/131 (25%)
galnt13XP_005168002.1 Glyco_tranf_2_3 115..359 CDD:290369 133/243 (55%)
pp-GalNAc-T 118..418 CDD:133004 160/299 (54%)
RICIN 431..560 CDD:238092 33/129 (26%)
Ricin_B_lectin 431..558 CDD:279046 32/127 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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