DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant2 and galnt18b

DIOPT Version :9

Sequence 1:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_003199061.1 Gene:galnt18b / 100310831 ZFINID:ZDB-GENE-091014-1 Length:609 Species:Danio rerio


Alignment Length:533 Identity:191/533 - (35%)
Similarity:284/533 - (53%) Gaps:79/533 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 VAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRNPMCRTKKYRE 199
            :.|..|...::.|...||       ||   |:        ||.|..:|.|||.|...|:...|..
Zfish   107 LGPESRRVALKMFQYYGY-------NG---YL--------SDRLSMDRAIPDYRPDGCKNMSYPS 153

  Fly   200 DLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYSDHPEDGLELAKIDK------ 258
            :||:.|::..|.|||.|.:||:|.||:||:|.||::||:||||.|::.|...:|....|      
Zfish   154 NLPQVSIVFIFVNEALSVILRSIHSVMNRTPSHLLKEIILVDDNSNNDELKEKLQDFVKETNAKQ 218

  Fly   259 ---VRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVVCPVID 320
               ::|:|:.::|||:||||.|..||.:.|:...|:|||.|..|.||:|:|::||.||::.|..|
Zfish   219 PGFIKVVRHSRQEGLIRSRVSGWRAASAPVVALFDAHVEFNIGWAEPILQRIKEDRTRIISPSFD 283

  Fly   321 VISMDNFQY--IGASADLRGGFDWNLIFKW-EYLSPSERAMRHNDPTTAIRTPMIAGGLFVIDKA 382
            .|..|.|:.  ...||.   ||||.|   | .||:|.:.....|:.|..||:|.:. |.||:|:.
Zfish   284 NIKYDTFEIEEYPLSAQ---GFDWEL---WCRYLNPPKSWWNLNNSTAPIRSPALI-GCFVVDRL 341

  Fly   383 YFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTFPGGSGNVFARNT 447
            ||.::|..|..|:::||||:|:..||||||||:|::||:|:.|:.|...||| ...:.:| .||.
Zfish   342 YFAEIGLLDEGMEIYGGENVELGVRVWQCGGSVEVLPCARIAHIERAHKPYT-EDLTAHV-RRNA 404

  Fly   448 RRAAEVWMDDYKQHYYNAVPLAKNIP-------FGNIDDRLALKEKLHCKPFKWYLENVYPDLQA 505
            .|.||||||::|.|.|    :|.|||       .|:|.:|.||::||.||.|:|||.|:||:::.
Zfish   405 LRVAEVWMDEFKSHVY----MAWNIPQEDSGIDIGDIAERKALRKKLQCKTFRWYLVNIYPEMRM 465

  Fly   506 -PDPQEVGQFRQD-STE-CLDTMGHLIDGTVGIFPCHN-TGGNQEWAFTKR---GEIK-----HD 558
             .|....|..|.. .|: ||| .|...|....::.||. |..|..:..|::   |.:.     .|
Zfish   466 YTDTVAYGVLRNSLKTDLCLD-QGPDTDNIPILYLCHGMTPQNVYYTSTQQLFVGILSPTVDDDD 529

  Fly   559 DLCLTLVTFARGSQVVLKACDDSENQR----WIMREGGLVRHYKINVCLD--SRDQSQQG--VSA 615
            :.||..|    ..:..|..|..:..:|    |...:||.:::.|...||:  ..:.::.|  ::.
Zfish   530 NKCLVDV----NGRPRLIECSYAVAKRMKLHWRFTQGGSIQNTKSKRCLELVENNDNEFGFQLTL 590

  Fly   616 QHCNSALGTQRWS 628
            |.|..    |.|:
Zfish   591 QKCTG----QNWT 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 104/243 (43%)
pp-GalNAc-T 205..500 CDD:133004 136/313 (43%)
Ricin_B_lectin 511..627 CDD:279046 31/134 (23%)
RICIN 513..629 CDD:238092 31/135 (23%)
galnt18bXP_003199061.1 pp-GalNAc-T 159..460 CDD:133004 136/313 (43%)
Glyco_tranf_2_2 160..421 CDD:287123 117/273 (43%)
Ricin_B_lectin 471..598 CDD:279046 31/135 (23%)
RICIN 473..600 CDD:238092 32/136 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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