DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpa and ptpa

DIOPT Version :9

Sequence 1:NP_523466.2 Gene:Ptpa / 33555 FlyBaseID:FBgn0016698 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001003425.2 Gene:ptpa / 445031 ZFINID:ZDB-GENE-040801-11 Length:324 Species:Danio rerio


Alignment Length:316 Identity:145/316 - (45%)
Similarity:209/316 - (66%) Gaps:8/316 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASGINQAAGKLPAIA--------KKVQNLGDMGVWQKSRAFHDLIGYINGTSSAIQGIKTTDEIF 58
            |||.:....|.|:..        |::..:.|||.|::|:|:.|.||:|...:..::|.|.|.|..
Zfish     7 ASGSSHEDDKPPSSVGFNFMVPKKEISMVPDMGKWKRSQAYADYIGFILTLNEGVKGKKLTCEYQ 71

  Fly    59 ESEMLKKLLRLFDALEKLVEQNPPLEQPQRFGNKAYRDWAQAMRELLPELLEQLLPDDKKRYQVE 123
            .||.::|||.|...|::.:::.||::||.||||||:|.|...:.:....|:..:||.:::....|
Zfish    72 VSETVEKLLALLGTLDQWIDETPPVDQPSRFGNKAFRTWYAKLDQEAEALVAGVLPAERQDAAPE 136

  Fly   124 LGQYLTESFGNATRIDYGTGHELSFLFFLCSLFKAEILQERDIVSAALRLFNRYLELARQLQRTY 188
            :..||.||.||:||||||||||.:|..|||.|.|...|:..|.::....:|::||.:.|:||:||
Zfish   137 IAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKVGALRMEDQLAIIFNVFDKYLRVMRKLQKTY 201

  Fly   189 NMEPAGSQGVWSLDDFQFVPFIWGSAQLAVKSPFDPSKFVDEAIITEYKDHFMFISCIDYICKVK 253
            .||||||||||.||||||:||||||:||......:|..||:|.::.||...:||:.||.:|.::|
Zfish   202 RMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPTLEPRHFVEEKVVNEYHQDYMFLECIKFINEMK 266

  Fly   254 TGHFGEHSNQLWSITDVPTWAKINAGLVKMYQKEILSKFPVIQHVYFGELMTFEPV 309
            ||.|.|||||||:|:.||:|:|:|.||::||:.|.|.|||||||..||.|::.:||
Zfish   267 TGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLSIQPV 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpaNP_523466.2 PTPA 17..308 CDD:281137 138/290 (48%)
ptpaNP_001003425.2 PTPA 28..321 CDD:281137 138/292 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594199
Domainoid 1 1.000 299 1.000 Domainoid score I1413
eggNOG 1 0.900 - - E1_COG5057
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6149
Inparanoid 1 1.050 304 1.000 Inparanoid score I2642
OMA 1 1.010 - - QHG54183
OrthoDB 1 1.010 - - D1165705at2759
OrthoFinder 1 1.000 - - FOG0002736
OrthoInspector 1 1.000 - - oto41126
orthoMCL 1 0.900 - - OOG6_101438
Panther 1 1.100 - - LDO PTHR10012
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1030
SonicParanoid 1 1.000 - - X2111
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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