DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpa and Ptpa

DIOPT Version :9

Sequence 1:NP_523466.2 Gene:Ptpa / 33555 FlyBaseID:FBgn0016698 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001102047.1 Gene:Ptpa / 362102 RGDID:1308354 Length:323 Species:Rattus norvegicus


Alignment Length:296 Identity:143/296 - (48%)
Similarity:204/296 - (68%) Gaps:0/296 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KKVQNLGDMGVWQKSRAFHDLIGYINGTSSAIQGIKTTDEIFESEMLKKLLRLFDALEKLVEQNP 81
            |::..:.|||.|::|:|:.|.||:|...:..::|.|.|.:...||.::||:.|.|.|::.:::.|
  Rat    28 KEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKKLTFDYKVSEAIEKLVALLDTLDRWIDETP 92

  Fly    82 PLEQPQRFGNKAYRDWAQAMRELLPELLEQLLPDDKKRYQVELGQYLTESFGNATRIDYGTGHEL 146
            |::||.||||||||.|...:.:....|:..::|.:......|:..||.|:.||:||||||||||.
  Rat    93 PVDQPSRFGNKAYRTWYAKLDQEAENLVATVIPTNLAAAVPEVAVYLKEAVGNSTRIDYGTGHEA 157

  Fly   147 SFLFFLCSLFKAEILQERDIVSAALRLFNRYLELARQLQRTYNMEPAGSQGVWSLDDFQFVPFIW 211
            :|..|||.|.|..:|:..|.|:...::|:||||:.|:||:||.||||||||||.||||||:||||
  Rat   158 AFAAFLCCLCKIGVLRVDDQVAIVFKVFDRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIW 222

  Fly   212 GSAQLAVKSPFDPSKFVDEAIITEYKDHFMFISCIDYICKVKTGHFGEHSNQLWSITDVPTWAKI 276
            ||:||......:|..||||..::|....:||:.||.:|.::|||.|.|||||||:|:.||:|:|:
  Rat   223 GSSQLIDHPHLEPRHFVDEKAVSENHKDYMFLQCILFITEMKTGPFAEHSNQLWNISAVPSWSKV 287

  Fly   277 NAGLVKMYQKEILSKFPVIQHVYFGELMTFEPVSSG 312
            |.||::||:.|.|.|||||||..||.|:...||:||
  Rat   288 NQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpaNP_523466.2 PTPA 17..308 CDD:281137 139/290 (48%)
PtpaNP_001102047.1 PTPA 26..316 CDD:281137 139/287 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352266
Domainoid 1 1.000 300 1.000 Domainoid score I1383
eggNOG 1 0.900 - - E1_COG5057
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6149
Inparanoid 1 1.050 307 1.000 Inparanoid score I2545
OMA 1 1.010 - - QHG54183
OrthoDB 1 1.010 - - D1165705at2759
OrthoFinder 1 1.000 - - FOG0002736
OrthoInspector 1 1.000 - - oto96378
orthoMCL 1 0.900 - - OOG6_101438
Panther 1 1.100 - - LDO PTHR10012
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2111
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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