DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15412 and FBXL17

DIOPT Version :9

Sequence 1:NP_001259996.1 Gene:CG15412 / 33553 FlyBaseID:FBgn0031528 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_005272105.1 Gene:FBXL17 / 64839 HGNCID:13615 Length:712 Species:Homo sapiens


Alignment Length:400 Identity:80/400 - (20%)
Similarity:156/400 - (39%) Gaps:105/400 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 LVKLYVPYIANDRLLEEIGNC------CTRLQI---LDISGETDITEIGIDLLAKGVCSQSLTVV 200
            |:|::.....::|.|.....|      |...|.   ||:|....:|:   :||.| :.|:|..::
Human   329 LLKIFSNLSLDERCLSASLVCKYWRDLCLDFQFWKQLDLSSRQQVTD---ELLEK-IASRSQNII 389

  Fly   201 DVGMPGEENICYSDIALILEHCP--------QVETLSTYSFVGAS-----LKFIHDNVDDRF--- 249
            ::.:....::..:.:.::...||        :.:.||..|.:..:     |:.:|....|:.   
Human   390 EINISDCRSMSDNGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDE 454

  Fly   250 -------KCR-LKYIHDTG-----TDEATLQVIMQTCPRLETLYLDSPK---TGSLRALSTRNLR 298
                   ||| ||.|| .|     :||..: ||.:.|.:|:.:|:...|   ..|::|.: .:..
Human   455 GLKQLGSKCRELKDIH-FGQCYKISDEGMI-VIAKGCLKLQRIYMQENKLVTDQSVKAFA-EHCP 516

  Fly   299 KLKIYKFVVAELLPLLERPIGRNLRHLTMIKGLGNLELGKLARL-----------CPSLIDLD-C 351
            :|:...|:...:       ..:.:.|||.::.|.:|:|..:..|           |.:|..|: |
Human   517 ELQYVGFMGCSV-------TSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLC 574

  Fly   352 --YMIDSLSYGAGHAKFQQLEGLEILSSAILTSSLKAFLCNSTDLKRLAVDTVEFTDDDIMSMFM 414
              ::|:.........:.|.|:.|.::|            |..||...:|:.....|.:.:     
Human   575 LNWIINDRCVEVIAKEGQNLKELYLVS------------CKITDYALIAIGRYSMTIETV----- 622

  Fly   415 QHDFKVLEDV-WFTLAPELTVQSVELLMDSCPELQSVGQLNGWSLTPD-------DLALIRGLLK 471
                    || |   ..|:|.|...|:..|...|:.:|.:....:..|       .::::..|:.
Human   623 --------DVGW---CKEITDQGATLIAQSSKSLRYLGLMRCDKVRVDYQVVCFLHISIVNSLMS 676

  Fly   472 SGNSSIVLTP 481
            ...|..:.||
Human   677 YPLSFSISTP 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15412NP_001259996.1 AMN1 <142..>228 CDD:187754 18/99 (18%)
leucine-rich repeat 145..168 CDD:275381 6/28 (21%)
leucine-rich repeat 169..196 CDD:275381 9/29 (31%)
leucine-rich repeat 197..224 CDD:275381 2/34 (6%)
leucine-rich repeat 225..252 CDD:275381 7/41 (17%)
leucine-rich repeat 253..275 CDD:275381 10/26 (38%)
leucine-rich repeat 369..393 CDD:275381 4/23 (17%)
leucine-rich repeat 394..416 CDD:275381 2/21 (10%)
FBXL17XP_005272105.1 F-box-like 321..368 CDD:289689 9/38 (24%)
leucine-rich repeat 362..387 CDD:275381 9/28 (32%)
leucine-rich repeat 388..413 CDD:275381 1/24 (4%)
AMN1 411..573 CDD:187754 38/171 (22%)
leucine-rich repeat 414..439 CDD:275381 3/24 (13%)
leucine-rich repeat 440..465 CDD:275381 5/24 (21%)
leucine-rich repeat 466..491 CDD:275381 10/26 (38%)
leucine-rich repeat 492..517 CDD:275381 5/25 (20%)
leucine-rich repeat 518..541 CDD:275381 5/29 (17%)
leucine-rich repeat 542..567 CDD:275381 5/24 (21%)
AMN1 547..>652 CDD:187754 26/132 (20%)
leucine-rich repeat 568..593 CDD:275381 4/24 (17%)
leucine-rich repeat 594..615 CDD:275381 7/32 (22%)
leucine-rich repeat 619..641 CDD:275381 7/37 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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