DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15412 and CG44005

DIOPT Version :9

Sequence 1:NP_001259996.1 Gene:CG15412 / 33553 FlyBaseID:FBgn0031528 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001097635.2 Gene:CG44005 / 5740769 FlyBaseID:FBgn0264747 Length:370 Species:Drosophila melanogaster


Alignment Length:381 Identity:84/381 - (22%)
Similarity:147/381 - (38%) Gaps:146/381 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SVRSLSDS-ALAELANLLVSTIS------YAQYAPDVQLDINIVMVELNEYLAQLGATPNI---- 59
            ::|:|.|. .||::.:.|....|      |.:::|.:...:.:..|    .||..|  |:|    
  Fly    21 NLRNLRDKLRLAQVDDYLGKAFSYHSRSDYKKFSPKIHFPVRLYRV----LLANCG--PSIVEFT 79

  Fly    60 -----YQDLLRVI-------LSSDYLDANMRFT-CLQ-MLLNCGVTFLMTEVFPFSYYEKILQVI 110
                 :.|||...       |.|..:.|.:|.: .|| .|||...:.:..|:       |:....
  Fly    80 CGSDTWSDLLAKSIAKYCPNLESVNISATLRNSHSLQFFLLNLANSLISVEL-------KLNDSC 137

  Fly   111 AAQGAGLRVLNIKGIWVKE-EHM-HYMYD--IVRKCKQLVKLYVPYIANDRLLEEI-------GN 164
            .:.    |:||.    |.| :|: .::|:  |.|...||.||..        |||:       |.
  Fly   138 QSP----RILNA----VAELKHLKKFLYEGYIDRGVNQLCKLVD--------LEELQLIYQGRGY 186

  Fly   165 CCTRLQILDISGETDITEIGIDLLAKGVCSQSLTVVDVGMPGEENI---------------CYSD 214
            .|..:.:|.|.|  ::|.:           :.|||.::.:...|:.               |  :
  Fly   187 RCRAVNLLQICG--NMTNL-----------RRLTVSNISISQPESFHPMIWPNLKDLKMQNC--E 236

  Fly   215 IALILEHCPQVETLSTYSFVGASLKFIHDNVDDRFKCRLK-----YIHDTGTD------------ 262
            |:.::..||:::||        .:||.        |||:|     :|...|.:            
  Fly   237 ISTVMPDCPKLKTL--------YIKFC--------KCRIKGYVCSFILKNGNNIEEIDESCEPAP 285

  Fly   263 ---EATLQVIMQTCPRLETLYLDSPKTGSLRALSTRNLRKLKIYKFVVAELLPLLE 315
               ::.|||| ::||:|:.|   |.:.|.           :|||:..|..::.:|:
  Fly   286 FDGQSFLQVI-RSCPKLQVL---STQMGG-----------IKIYQAFVTSVVDILK 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15412NP_001259996.1 AMN1 <142..>228 CDD:187754 21/107 (20%)
leucine-rich repeat 145..168 CDD:275381 8/29 (28%)
leucine-rich repeat 169..196 CDD:275381 4/26 (15%)
leucine-rich repeat 197..224 CDD:275381 7/41 (17%)
leucine-rich repeat 225..252 CDD:275381 5/26 (19%)
leucine-rich repeat 253..275 CDD:275381 8/41 (20%)
leucine-rich repeat 369..393 CDD:275381
leucine-rich repeat 394..416 CDD:275381
CG44005NP_001097635.2 leucine-rich repeat 174..202 CDD:275380 8/29 (28%)
leucine-rich repeat 203..226 CDD:275380 4/33 (12%)
leucine-rich repeat 227..246 CDD:275380 3/20 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR16134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.