DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15412 and fbxl3

DIOPT Version :10

Sequence 1:NP_001259996.1 Gene:CG15412 / 33553 FlyBaseID:FBgn0031528 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001016128.1 Gene:fbxl3 / 548882 XenbaseID:XB-GENE-1014531 Length:433 Species:Xenopus tropicalis


Alignment Length:363 Identity:71/363 - (19%)
Similarity:121/363 - (33%) Gaps:125/363 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ELNE-YLAQLGATPNIYQDLLRVILS--SDYL------------DANMRFTCLQMLLNCGV---- 90
            |||: ..:.|.||   :.||::.|:.  |::|            .|......|..|:||.:    
 Frog    87 ELNQPATSYLNAT---HPDLIKQIIKRHSNHLQYVSFKVDSSKESAEAACDILSQLVNCSLKTLG 148

  Fly    91 -------TFLMTEVFPFSYYEKILQVIAAQGAGLRVLNIKGIWVKEEHMHYMYD----------- 137
                   :|:   ..|.|::...|.|:......|..|.|....|.:..:..:..           
 Frog   149 LISTARPSFM---DLPKSHFISALTVVFVNSKSLSSLKIDDTPVDDPSLKVLVANNSDTLKLLKM 210

  Fly   138 -------------IVRKCKQLVKLYVP-YIANDRLLEEIGNCCTRLQILDISGETDI--TEIGID 186
                         :..:|..|.:|.:. |:.:|.||            :.:|.|..:  ..:.||
 Frog   211 SSCPHVSPAGILCVADQCHGLRELALNYYLLSDELL------------IALSSEKHVRLEHLRID 263

  Fly   187 LLAKGVCSQSLTVVDVGMPGE---ENICYSDIALILEHCPQVETLSTYSFVGASLKFIHDNVDDR 248
            ::::.             ||:   ..|..|....:::|.|:| .|..|.|:      ..:..|..
 Frog   264 VVSEN-------------PGQTQFHTIQKSSWDALIKHSPKV-NLVMYFFL------YEEEFDPF 308

  Fly   249 FKCRLKYIH---DTGTDEATLQVIMQTCPRLETLYLDSPKTGSLRALSTRNLRKLKIYKFVVAEL 310
            |:......|   .....:..|..:..|||||..|           .:....||.|.      .||
 Frog   309 FRYETPVTHLYFGRSVSKEVLGRVGMTCPRLVEL-----------VVCANGLRPLD------EEL 356

  Fly   311 LPLLERPIGRNLRHLTMIKGLGNLELGKLARLCPSLID 348
            :.:.||     .:.||.| |||..|:.     |.:.::
 Frog   357 IRIAER-----CKSLTAI-GLGECEVS-----CSAFVE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15412NP_001259996.1 AMN1 <142..>228 CDD:187754 18/91 (20%)
leucine-rich repeat 145..168 CDD:275381 6/23 (26%)
leucine-rich repeat 169..196 CDD:275381 4/28 (14%)
leucine-rich repeat 197..224 CDD:275381 5/29 (17%)
leucine-rich repeat 225..252 CDD:275381 6/26 (23%)
leucine-rich repeat 253..275 CDD:275381 4/24 (17%)
leucine-rich repeat 369..393 CDD:275381
leucine-rich repeat 394..416 CDD:275381
fbxl3NP_001016128.1 F-box_FBXL3 40..81 CDD:438949
FBXL3_LRR 84..433 CDD:467832 71/363 (20%)
leucine-rich repeat 179..204 CDD:275381 4/24 (17%)
leucine-rich repeat 205..230 CDD:275381 1/24 (4%)
leucine-rich repeat 231..256 CDD:275381 8/36 (22%)
leucine-rich repeat 257..293 CDD:275381 9/49 (18%)
leucine-rich repeat 294..338 CDD:275381 9/49 (18%)
leucine-rich repeat 339..365 CDD:275381 9/47 (19%)
leucine-rich repeat 366..391 CDD:275381 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

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