DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15412 and Fbxl6

DIOPT Version :10

Sequence 1:NP_001259996.1 Gene:CG15412 / 33553 FlyBaseID:FBgn0031528 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001005563.1 Gene:Fbxl6 / 362941 RGDID:1359687 Length:535 Species:Rattus norvegicus


Alignment Length:387 Identity:82/387 - (21%)
Similarity:136/387 - (35%) Gaps:106/387 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 AAQGAGLRVLNIKG--------IWVKEEHMHYMYDIVRKCKQLVKLYVPYIAND--RLLEEIGNC 165
            ||:|      |:||        .|:          |..:..||.:|.:.:..:.  .:||.:...
  Rat   162 AAKG------NLKGEKKLLACLEWL----------IPNRFSQLQRLTLIHWKSQVHSVLELVSKF 210

  Fly   166 CTRLQILDISGETDITEIGIDLLAKGVCSQSLTVVDVGMPGEENICYSDIALILEHCPQVETLST 230
            |.||..|.:|....:|...:.:|||..|  .|..:|:                  |...||:.:.
  Rat   211 CPRLTFLKLSDCHGVTAETLVMLAKACC--QLHSLDL------------------HHSMVESTAV 255

  Fly   231 YSFVGASLKFIHDNVDDRFKCRLKYIHDTGTDEATLQVIMQTCPRLETLYL-------DSPKTGS 288
            .||:        :....|.: ||...:.:.|......::...|.:|:.|.:       ::|....
  Rat   256 VSFL--------EEAGSRMR-RLWLTYSSQTTAILGALLGNCCSQLQVLEVSAGMSCNNTPLQLP 311

  Fly   289 LRALSTRNLRKLKIYKFVVAELLPLLERPIGR---------NLRHLTMIKG----LGNLELGKLA 340
            :.||. |...:|::.:.:....||   :|.||         :|..|.:...    :.|..||:|.
  Rat   312 VEALQ-RGCPQLQVLRLLNLIWLP---KPCGRGAPQGPGFPSLEELCLAGSTCSFVSNEVLGRLL 372

  Fly   341 RLCPSLIDLD---CYMIDSLSYGAGHAKFQQLE----GLEILSSAILTSSLKAFLCNST---DLK 395
            ...|.|..||   |..|...  |..|...|:||    ||..:|..:..:...:.|....   .|:
  Rat   373 HCSPKLRLLDLRGCARITPT--GLCHLPCQELEQLYLGLYGMSDGLALAKDGSPLLTQKWYHTLR 435

  Fly   396 RLAVDTVEFTDDDIMSMFMQHDFKVLEDVWFTLAPEL----------TVQSVELLMDSCPEL 447
            .|......|::.|     ::....|.......|.|.|          |..:|..::.|||.|
  Rat   436 ELDFSGQGFSEKD-----LEQALAVFSGTTEGLPPALCSLNLRGTRVTPSTVSSVISSCPGL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15412NP_001259996.1 AMN1 <142..>228 CDD:187754 20/87 (23%)
leucine-rich repeat 145..168 CDD:275381 5/24 (21%)
leucine-rich repeat 169..196 CDD:275381 8/26 (31%)
leucine-rich repeat 197..224 CDD:275381 3/26 (12%)
leucine-rich repeat 225..252 CDD:275381 5/26 (19%)
leucine-rich repeat 253..275 CDD:275381 3/21 (14%)
leucine-rich repeat 369..393 CDD:275381 6/30 (20%)
leucine-rich repeat 394..416 CDD:275381 4/21 (19%)
Fbxl6NP_001005563.1 F-box_FBXL6 104..150 CDD:438891
AMN1 171..390 CDD:187754 52/261 (20%)
leucine-rich repeat 188..213 CDD:275381 5/24 (21%)
leucine-rich repeat 214..239 CDD:275381 8/26 (31%)
leucine-rich repeat 240..291 CDD:275381 12/77 (16%)
leucine-rich repeat 292..321 CDD:275381 6/29 (21%)
leucine-rich repeat 322..349 CDD:275381 6/29 (21%)
AMN1 <349..500 CDD:187754 35/151 (23%)
leucine-rich repeat 350..377 CDD:275381 6/26 (23%)
leucine-rich repeat 378..401 CDD:275381 7/24 (29%)
leucine-rich repeat 434..466 CDD:275381 6/36 (17%)
leucine-rich repeat 467..491 CDD:275381 5/23 (22%)
Blue background indicates that the domain is not in the aligned region.

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