DRSC/TRiP Functional Genomics Resources

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Protein Alignment GramD1B and gramd1ba

DIOPT Version :9

Sequence 1:NP_995623.2 Gene:GramD1B / 33552 FlyBaseID:FBgn0085423 Length:1249 Species:Drosophila melanogaster
Sequence 2:XP_021335128.1 Gene:gramd1ba / 568698 ZFINID:ZDB-GENE-091118-87 Length:882 Species:Danio rerio


Alignment Length:1194 Identity:304/1194 - (25%)
Similarity:489/1194 - (40%) Gaps:378/1194 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 QSQSPSQCQQAQENPEHLQQQSQP------------------EEELQAEAPGSNAGDRRDSITEE 130
            |.|.| :|..::.:| :|...|.|                  :|:|:.|.               
Zfish    11 QIQGP-ECNGSEVDP-NLSSSSSPALRRKRFKMRRMKNVMSEKEQLEKEQ--------------- 58

  Fly   131 ITITSTTNSSQSTKLLTIQEAAGSFEQSSVSAVSTSSKQIASTTAGGSPPAAAAPGANEFNGSVL 195
               ...:.|.:..:|.:|:....|.|.::.|:.||.|               |:|....|   :|
Zfish    59 ---LQRSGSKEYLQLPSIEITPSSDEDAAWSSCSTPS---------------ASPQRRRF---LL 102

  Fly   196 R-LTQAATSTSPGSISSAGNTATLGAAPSINIVSSESTR---DQTQQPQSVDPNGVAAPGDSPSS 256
            | ..:.......||.||:..::...:.      ..||||   ..|::..:...:..:.|..||..
Zfish   103 RKWLRGGEKKEHGSESSSQQSSLQSSH------EEESTRYLSPNTREDSTASNSNRSTPACSPVL 161

  Fly   257 RKSSTSSKGKASQAKLSTSSSGRDEQDISQHRLSDLTQHELSLLRVDREQQVTSSSSTSNEKPAK 321
            ||.|.|...::.:.:...........|.|.      :..|.::.|...:...|:.:...|.|..|
Zfish   162 RKRSRSPTPQSPEGENMVEKGSDHSSDKSP------STPEPAVQRTYSQSLHTTRTGGKNSKSHK 220

  Fly   322 TSRLSERAKKKSWYNVIYPNYKSRAEDFKKLFKDVPNDERLIVDYSCALQRDILVQGRLYVSQNY 386
              |||:  |.:|||||:.|.||.|.|||:||||.:|:.||||||||||||||||:|||||:|:|:
Zfish   221 --RLSK--KSQSWYNVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENW 281

  Fly   387 VCFHANIFSWETHVSIKWKDVTAITKEKTALVIPNAISISSGKDKYFFATFTSRDKSFLMLFRVW 451
            :||::|||.|||.::::.|||.::||||||.:|||||.:.:..:|:||.:|.:||::::|:||:|
Zfish   282 ICFYSNIFRWETLLTVRLKDVCSMTKEKTARLIPNAIQLCTDNEKHFFTSFGARDRTYMMMFRLW 346

  Fly   452 QNTLMNKQFSPQEIWQHVHTCYGDELGLTTDDEDYIDPTLNKTNEPDFDFQTAIDDDSYSQRQSQ 516
            ||.|::|...|:|:|..||.|||:|||||:|||||:        .||.||.|.    .|.:....
Zfish   347 QNALLDKPLCPKELWHFVHQCYGNELGLTSDDEDYV--------PPDDDFNTM----GYCEEIPA 399

  Fly   517 QSNQSNQSNPLLPQSGNSSASSGGGVRASAPRKSKTKYFFNSSKSSANASASGSDN-NKTRES-- 578
            :.|::|                                                || |||.::  
Zfish   400 EDNEAN------------------------------------------------DNCNKTPDAKM 416

  Fly   579 --SRKLNKKMKQNAKELTLSSVKPTELSVSVTMSAPNVSSSSTAGSTTASSSTIANHTGSGSGSG 641
              |.:|::|:..|:   :|:|...|:  ..:....|.|...:..........|:           
Zfish   417 DISPQLHRKVFPNS---SLNSTDSTD--APLNFDVPPVEDFTNCIPEDLLPLTL----------- 465

  Fly   642 SLSGSNTAAASGSGSDKMSAEKKVSTASNSAAVAAAEAAQSLASASSGSGSLESKMEMKRKLGKM 706
                               .:.|:|....||.|.|.            |.||:.           
Zfish   466 -------------------PDNKLSETGGSAHVPAP------------SPSLDF----------- 488

  Fly   707 HRQREEGKNAAESVPTDVSDSSDSEENNLPFVPTTECTSTHE---GRQIVHTILPINVDTLFNLL 768
                    |..|.:||::||||::.:..       |..:..|   |:..::.:...:||.|.::|
Zfish   489 --------NDNEDLPTELSDSSETHDEG-------EVQAFQEDLNGKLYINEVYKFSVDKLHDIL 538

  Fly   769 FSKSKFITDFHAMRKSTDLVLGEWTKNEEGLQVRTVNVTVQLAASVGPKTSKVTEYQTQRECSKP 833
            |::|:|:.:|...|:.:|:|...|.|.:.|.|.|.:..|:.|:..:.|||:.|||.||..:.|:.
Zfish   539 FTESQFMREFLEQRRFSDVVYHPWRKEDTGNQTREIMYTISLSNPLAPKTATVTETQTLHKASQV 603

  Fly   834 GELYSIDVNSVNAGIPYAESFSVLIHFCLARTVDDHTMLSIHTQIKYKKSIWGVVKGFIEKNTWA 898
            .|.|.||...:...:||.:.|..|..:.|.|...:...|.:..:::|:|..||:||||||:|.|:
Zfish   604 SECYIIDAEVIAHDVPYHDYFYTLNRYMLTRVARNKCRLRVSAELRYRKQPWGLVKGFIERNFWS 668

  Fly   899 GLEDFFGAQLHALQSETCIPPAKGKGRRPRRGMNQQSATSTSTTSITTGALHTATSTDNDSIQES 963
            ||:::|    ..|:.|.         .:.:..:::||..|.        ||.|||      ::..
Zfish   669 GLDEYF----RYLELEL---------NKVQLVLSEQSPKSK--------ALRTAT------VRRR 706

  Fly   964 RHPHQQDQHQHQHLHMHHHHHHHHGSQHHHHDARHSHHHHHQPLLPHHQQQHPHHWHHRKALLQS 1028
            :.|                                         |.|.:.||             
Zfish   707 KRP-----------------------------------------LTHMRPQH------------- 717

  Fly  1029 GRGTATQIRPLEEAVGPAPAVDPLETQMLAAGGIPGAAVGAAAGHPLLLEGGKQQQLHHQQQMHH 1093
                      ::||:.|....:..::.:                         |:..|.......
Zfish   718 ----------MDEALSPVTTPEDEKSVI-------------------------QRIKHVAGSTQT 747

  Fly  1094 HHLQPHKQHLQQQQLHLGGGDGQPLASGQGSQGHRLRHKGLWLLVI-----LLLCLMLALNVILL 1153
            .|:..|                       .|:|..|......||:|     :.|.|::.||::|.
Zfish   748 RHMPDH-----------------------ASEGLALYSVSKLLLIISSVICVSLVLLVFLNLMLF 789

  Fly  1154 LKLWRLEERIDVDLNRRARMPSLAAL-------SELPSTNQEWLELLRDQEMAHENELHKWQQVL 1211
            .|||.||....          |||:.       |:||.|..||.:||..|:..||:||.||::::
Zfish   790 YKLWMLEYTAQ----------SLASWQGLRSHESKLPQTQIEWAQLLESQQRYHESELEKWREII 844

  Fly  1212 QTAIELLKKVSIVCEKITNDSHLR 1235
            ::::.||.::.....|:.....||
Zfish   845 KSSVLLLDEMRESLMKLQKGIGLR 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GramD1BNP_995623.2 PH-GRAM_GRAMDC 358..451 CDD:275406 54/92 (59%)
DUF4782 751..897 CDD:292635 49/145 (34%)
gramd1baXP_021335128.1 PH-GRAM_GRAMDC 253..346 CDD:275406 54/92 (59%)
DUF4782 521..669 CDD:318273 50/147 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589818
Domainoid 1 1.000 156 1.000 Domainoid score I4141
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 441 1.000 Inparanoid score I1628
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D322809at33208
OrthoFinder 1 1.000 - - FOG0000885
OrthoInspector 1 1.000 - - otm24894
orthoMCL 1 0.900 - - OOG6_101929
Panther 1 1.100 - - O PTHR23319
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X567
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.900

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