DRSC/TRiP Functional Genomics Resources

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Protein Alignment GramD1B and gramd2aa

DIOPT Version :10

Sequence 1:NP_995623.2 Gene:GramD1B / 33552 FlyBaseID:FBgn0085423 Length:1249 Species:Drosophila melanogaster
Sequence 2:XP_005166658.1 Gene:gramd2aa / 555179 ZFINID:ZDB-GENE-040724-9 Length:354 Species:Danio rerio


Alignment Length:310 Identity:90/310 - (29%)
Similarity:144/310 - (46%) Gaps:52/310 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 AAPGDSPSS-------RKSSTSSKGKASQAKLSTSSSGRDE-QDISQHRLSDLTQHELSLLRVDR 304
            ||..::||:       |....||:...::.:..:.|..:|: :|:..     ||.|:.|....|.
Zfish     7 AASSEAPSAEGPELQRRPHGYSSRTCRTRVRPKSMSDHQDQAEDVGL-----LTPHDQSEPSKDD 66

  Fly   305 EQ--QVTSSSSTSNEKPAKTSRLSERAKKKSWYNVIYPNYKSRAEDFKKLFKDVPNDERLIVDYS 367
            :.  ::......|.|...|..|.|..:|    ||..|          .|||:.||.:|.|:..||
Zfish    67 DMHFRIHLIDDLSYEDVKKCYRGSTVSK----YNAQY----------HKLFQSVPKEELLMKVYS 117

  Fly   368 CALQRDILVQGRLYVSQNYVCFHANIFSWETHVSIKWKDVTAITKEKTALVIPNAISISS-GKDK 431
            |||.||||:|||||:|:|::||:||:|..:..|:|....|..:.|.|||.::||.::|:: ...|
Zfish   118 CALLRDILLQGRLYISRNWLCFYANLFGKDIKVAIPVASVRLVKKHKTAGLVPNGLAITTDSSQK 182

  Fly   432 YFFATFTSRDKSFLMLFRVWQNTLMN--KQFSPQEIWQHVHTCYGDELGLTTDDEDYIDPTLNKT 494
            |.|.:..|||..:.:|.|:..:..:|  |..|.::..:..::...||.           |.....
Zfish   183 YVFVSLLSRDSVYDVLRRICTHLQVNGKKILSLKQYMEEPNSLSLDEF-----------PVPEVF 236

  Fly   495 NEPDFDFQTAIDDDSYSQRQSQQSNQSNQSNPLLPQSGNSSASSGGGVRA 544
            ..|| :|...:   .:.::.|..|..|:     ||....:||||...|.|
Zfish   237 PVPD-EFPPVL---KWRRKPSVVSVASS-----LPDLLGNSASSLSAVDA 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GramD1BNP_995623.2 PH-GRAM_GRAMDC 358..451 CDD:275406 41/93 (44%)
VASt 751..899 CDD:464975
gramd2aaXP_005166658.1 PH-GRAM_GRAMDC 108..202 CDD:275406 41/93 (44%)
Blue background indicates that the domain is not in the aligned region.

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