DRSC/TRiP Functional Genomics Resources

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Protein Alignment GramD1B and GRAMD1C

DIOPT Version :9

Sequence 1:NP_995623.2 Gene:GramD1B / 33552 FlyBaseID:FBgn0085423 Length:1249 Species:Drosophila melanogaster
Sequence 2:NP_060047.3 Gene:GRAMD1C / 54762 HGNCID:25252 Length:662 Species:Homo sapiens


Alignment Length:669 Identity:192/669 - (28%)
Similarity:291/669 - (43%) Gaps:179/669 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 SLLRVDREQQVTSSSSTSNEKPAKTSRLSERAKKK------SW-----YNVIYPNYKSRAEDFKK 351
            |.|..|.::.|       .|.|:.|...:....||      :|     :.:....||.|.|::::
Human    16 SSLATDLQEDV-------EENPSPTVEENNVVVKKQGPNLHNWSGDWSFWISSSTYKDRNEEYRR 73

  Fly   352 LFKDVPNDERLIVDYSCALQRDILVQGRLYVSQNYVCFHANIFSWETHVSIKWKDVTAITKEKTA 416
            .|..:|:.||||.||:||||||||:|||||:|:|::||::|||.|||.:||..|::|.:||||||
Human    74 QFTHLPDTERLIADYACALQRDILLQGRLYLSENWLCFYSNIFRWETTISIALKNITFMTKEKTA 138

  Fly   417 LVIPNAISISSGKDKYFFATFTSRDKSFLMLFRVWQNTLMNKQFSPQEIWQHVHTCYGDELGLTT 481
            .:|||||.|.:..:|:||.:|.:||:|:|.:||:|||.|::|..:.||.||.:...||.||||..
Human   139 RLIPNAIQIVTESEKFFFTSFGARDRSYLSIFRLWQNVLLDKSLTRQEFWQLLQQNYGTELGLNA 203

  Fly   482 DDEDYIDPTLNKTNEPDFDFQTAIDDDSYSQRQSQQSNQSNQSNPLLPQSGNSSASSGGGVRASA 546
            ::.:              :...:|:|                   :.|:|...|:....|.|...
Human   204 EEME--------------NLSLSIED-------------------VQPRSPGRSSLDDSGERDEK 235

  Fly   547 PRKSKTKYFFNSSKSSANASASGSDNNKTRESSRKLNKKMKQNAKELTLSSVKPTELSVSVTMSA 611
            ..||.:   |.|...|..:.....|.|.::..   |.|:..||.|: |..|:.||          
Human   236 LSKSIS---FTSESISRVSETESFDGNSSKGG---LGKEESQNEKQ-TKKSLLPT---------- 283

  Fly   612 PNVSSSSTAGSTTASSSTIANHTGSGSGSGSLSGSNTAAASGSGSDKMSAEKKVSTASNSAAVAA 676
                                                             .|||::...       
Human   284 -------------------------------------------------LEKKLTRVP------- 292

  Fly   677 AEAAQSLASASSGSGSLESKMEMKRKLGKMHRQREEGKNAAESVPTDVSDSSDS-EENNLPFVPT 740
                         |.||:                   .|..|.:..|.|.:||| :|.|:|    
Human   293 -------------SKSLD-------------------LNKNEYLSLDKSSTSDSVDEENVP---- 321

  Fly   741 TECTSTHEGRQIVHTILPINVDTLFNLLFSKSKFITDFHAMRKSTDLVLGEWTKNEEGLQVRTVN 805
               .....||..::.|..|:.|.:|.|||:.|:|:..|.:.|...|:|...||....|.|:||:.
Human   322 ---EKDLHGRLFINRIFHISADRMFELLFTSSRFMQKFASSRNIIDVVSTPWTAELGGDQLRTMT 383

  Fly   806 VTVQLAASVGPKTSKVTEYQTQRECSKPGELYSIDVNSVNAGIPYAESFSVLIHFCLARTVDDHT 870
            .|:.|.:.:..|.:..||.||..:.|:....|.:|...:...:||.:.|..:..:|:.|:.....
Human   384 YTIVLNSPLTGKCTAATEKQTLYKESREARFYLVDSEVLTHDVPYHDYFYTVNRYCIIRSSKQKC 448

  Fly   871 MLSIHTQIKYKKSIWGVVKGFIEKNTWAGLEDFFGAQLHALQSETCI----------PPAKGKG- 924
            .|.:.|.:||:|..||:||..||||:|:.|||:|    ..|:|:..|          .|.|..| 
Human   449 RLRVSTDLKYRKQPWGLVKSLIEKNSWSSLEDYF----KQLESDLLIEESVLNQAIEDPGKLTGL 509

  Fly   925 RRPRRGMNQQSATSTSTTS 943
            ||.||..|:.:.|....:|
Human   510 RRRRRTFNRTAETVPKLSS 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GramD1BNP_995623.2 PH-GRAM_GRAMDC 358..451 CDD:275406 55/92 (60%)
DUF4782 751..897 CDD:292635 47/145 (32%)
GRAMD1CNP_060047.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 6/24 (25%)
PH-GRAM_GRAMDC 80..173 CDD:275406 55/92 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..237 7/43 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..284 11/97 (11%)
DUF4782 329..475 CDD:292635 47/145 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154616
Domainoid 1 1.000 153 1.000 Domainoid score I4283
eggNOG 1 0.900 - - E1_KOG1032
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I2786
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D322809at33208
OrthoFinder 1 1.000 - - FOG0000885
OrthoInspector 1 1.000 - - otm41932
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23319
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X567
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.860

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