DRSC/TRiP Functional Genomics Resources

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Protein Alignment GramD1B and ZC328.3

DIOPT Version :9

Sequence 1:NP_995623.2 Gene:GramD1B / 33552 FlyBaseID:FBgn0085423 Length:1249 Species:Drosophila melanogaster
Sequence 2:NP_001367991.1 Gene:ZC328.3 / 172343 WormBaseID:WBGene00022593 Length:616 Species:Caenorhabditis elegans


Alignment Length:679 Identity:163/679 - (24%)
Similarity:256/679 - (37%) Gaps:234/679 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 TQQPQSVDPNGVAAPGDSPSSRKSSTSSKGKASQAKLSTSSSGRDEQDISQHRLSDLTQHELSLL 300
            |.:|.|:..:|:....|:.:|.::.||.....:....|..|..|.|:..:               
 Worm     4 TSRPTSLSDSGIRLSPDTDNSAETLTSLASPLNDGDDSARSKSRMEKYFA--------------- 53

  Fly   301 RVDREQQVTSSSSTSNEKPAKTSRLSERAKKKSWYNVIYPNYKSRAEDFKKLFKD---VPNDERL 362
                            |||          .|..:..:|:|:|..|...|||:|.|   :..:::.
 Worm    54 ----------------EKP----------DKNIFMKLIHPSYHERNLQFKKIFVDKGLIEENDQF 92

  Fly   363 IVDYSCALQRDILVQGRLYVSQNYVCFHANIFSWETHVSIKWKDVTAITKEKTALVIPNAISIS- 426
            :..||||.||:||.|||:::||..|||:|||..|||.:.|..|:::.:.|.|.|.:.||:|.|. 
 Worm    93 LASYSCAYQREILAQGRMFISQFNVCFYANIIGWETTLVIPMKEISLVKKMKAAFIFPNSIQIER 157

  Fly   427 SGKDKYFFATFTSRDKSFLMLFRVWQNTL--MNKQFSPQEIWQHVHTCYGDELGLTTDDEDYIDP 489
            ..|:|||||:|.:||||:.:|....|...  ..|..:.:|:|..|:                   
 Worm   158 DTKEKYFFASFINRDKSYQVLTTAHQKVAGEDEKAMTREEVWDMVY------------------- 203

  Fly   490 TLNKTNEPDFDFQTAIDDDSYSQRQSQQSNQSNQSNPLLPQSGNSSASSGGGVRASAPRKSKTKY 554
                                    .|:..|..||:    |..|::.||              || 
 Worm   204 ------------------------NSEDKNSQNQT----PPDGSTPAS--------------TK- 225

  Fly   555 FFNSSKSSANASASGSDNNKTRESSRKLNKKMKQNAKELTLSSVKP-TELSVSVTMSAPNVSSSS 618
                         :.|..|.|..|||..|            ||:.| ||                
 Worm   226 -------------NTSTENMTNLSSRSFN------------SSISPRTE---------------- 249

  Fly   619 TAGSTTASSSTIANHTGSGSGSGSLSGSNTAAASGSGS--DKMSAEKKVSTASNSAAVAAAEAAQ 681
                    :||:.|:...         .||:.:|.|..  |:.||                    
 Worm   250 --------ASTLKNNNDK---------DNTSQSSTSSDFHDEDSA-------------------- 277

  Fly   682 SLASASSGSGSLESKMEMKRKLGKMHRQREEGKNAAESVPTDVSDSSDSEENNLPFVPTTEC-TS 745
                                                    |..|:..:.|:..:..||   | .|
 Worm   278 ----------------------------------------THFSEQFEQEDEIIEEVP---CPCS 299

  Fly   746 THEGRQIVHTILPINVDTLFNLLFSKSKFITDFHAMRKSTDLVLGEWTKNEEGLQVRTVNVTVQL 810
            .|.||.|:.....::|:..:.|||:.::|:|..:...|:.:.|...|.::.:|...||...||.|
 Worm   300 EHFGRLIMDKEFKVSVEKFYELLFTDNEFLTMLNQKTKTAEYVAATWVRDHQGDNTRTCTYTVSL 364

  Fly   811 AASVGPKTSKVTEYQTQRECSKPGELYSIDVNSVNAGIPYAESFSVLIHFCLARTVDDHTMLSIH 875
            |.::.||...|.|.|.......|.:...:...:.|:|:||:::|:|...:|::||......:.:|
 Worm   365 AHAMAPKAIIVNEKQILTHYPNPKQGIMMQKETQNSGVPYSDNFTVNCRYCISRTGPTSCRIKVH 429

  Fly   876 TQIKYKKSIWGVVKGFIEKNTWAGLEDFF 904
            ..:.||||.|.|||.||||.|..||::.:
 Worm   430 GGVMYKKSTWAVVKTFIEKGTHQGLDEHY 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GramD1BNP_995623.2 PH-GRAM_GRAMDC 358..451 CDD:275406 43/93 (46%)
DUF4782 751..897 CDD:292635 45/145 (31%)
ZC328.3NP_001367991.1 PH-GRAM_GRAMDC 88..180 CDD:275406 43/91 (47%)
DUF4782 305..453 CDD:406424 46/147 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159043
Domainoid 1 1.000 101 1.000 Domainoid score I4397
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D322809at33208
OrthoFinder 1 1.000 - - FOG0000885
OrthoInspector 1 1.000 - - otm14288
orthoMCL 1 0.900 - - OOG6_101929
Panther 1 1.100 - - LDO PTHR23319
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1861
SonicParanoid 1 1.000 - - X567
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

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