DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and SDS22

DIOPT Version :10

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_012728.1 Gene:SDS22 / 853641 SGDID:S000001676 Length:338 Species:Saccharomyces cerevisiae


Alignment Length:192 Identity:71/192 - (36%)
Similarity:109/192 - (56%) Gaps:11/192 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IINRSLIESSYLKHVHRGEGRRLHQLEPVVLEQILTMR---LEFNNILRIDHLWILPNLTKLCLN 89
            |.|.|.::|  ||::..| |.::|.:||...|.:..:.   |..|:|.|:.:|..|.||..|.:.
Yeast   150 IENLSTLKS--LKNLELG-GNKVHSIEPDSFEGLSNLEEIWLGKNSIPRLINLHPLKNLKILSIQ 211

  Fly    90 CNKIETIENIEMLTNLKDLNLSFNFIEKIENLDTLVNLEVLSLFSNKIEAIENIDMLTMLVIISL 154
            .||::.|||:|.||||::|.||.|||.|||.|:..:.|..|.:.||||.::||::.|:.|..|..
Yeast   212 SNKLKKIENLEELTNLEELYLSHNFITKIEGLEKNLKLTTLDVTSNKITSLENLNHLSNLTDIWA 276

  Fly   155 GNNLID-TVEGI-ERFRFMNNLKIINLEGNPI--AKRTNFCLLKYISAILPKLNYYEYTFIK 212
            ..|.|| :.|.: |....::.|:.|.||||||  ..:|:: ..|....:.|.|...:.|:|:
Yeast   277 SFNKIDQSFESLGENLSALSRLETIYLEGNPIQLENKTSY-RRKLTMNLPPSLQKIDATYIR 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 6/21 (29%)
LRR <80..313 CDD:443914 54/137 (39%)
PPP1R42 82..>176 CDD:455733 40/95 (42%)
leucine-rich repeat 83..104 CDD:275378 9/20 (45%)
leucine-rich repeat 105..126 CDD:275378 11/20 (55%)
leucine-rich repeat 127..148 CDD:275378 9/20 (45%)
leucine-rich repeat 149..162 CDD:275378 5/13 (38%)
SDS22NP_012728.1 leucine-rich repeat 44..67 CDD:275380
PPP1R42 <49..169 CDD:455733 8/21 (38%)
leucine-rich repeat 68..91 CDD:275380
leucine-rich repeat 92..114 CDD:275380
PPP1R42 112..332 CDD:455733 69/185 (37%)
leucine-rich repeat 115..136 CDD:275380
leucine-rich repeat 137..158 CDD:275380 3/7 (43%)
leucine-rich repeat 159..182 CDD:275380 8/23 (35%)
leucine-rich repeat 183..204 CDD:275380 6/20 (30%)
leucine-rich repeat 205..248 CDD:275380 22/42 (52%)
leucine-rich repeat 249..270 CDD:275380 9/20 (45%)
leucine-rich repeat 271..294 CDD:275380 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

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