DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and SDS22

DIOPT Version :9

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_012728.1 Gene:SDS22 / 853641 SGDID:S000001676 Length:338 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378
LRR_8 81..137 CDD:290566
LRR_4 81..121 CDD:289563
leucine-rich repeat 83..104 CDD:275378
LRR_4 103..143 CDD:289563
leucine-rich repeat 105..126 CDD:275378
LRR_8 126..184 CDD:290566
LRR_4 126..166 CDD:289563
leucine-rich repeat 127..148 CDD:275378
leucine-rich repeat 149..162 CDD:275378
SDS22NP_012728.1 inl_like_NEAT_1 <42..>174 CDD:411101
leucine-rich repeat 44..67 CDD:275380
leucine-rich repeat 68..91 CDD:275380
leucine-rich repeat 92..114 CDD:275380
PPP1R42 112..332 CDD:411060
leucine-rich repeat 115..136 CDD:275380
leucine-rich repeat 137..158 CDD:275380
leucine-rich repeat 159..182 CDD:275380
leucine-rich repeat 183..204 CDD:275380
leucine-rich repeat 205..248 CDD:275380
leucine-rich repeat 249..270 CDD:275380
leucine-rich repeat 271..294 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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