DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppr-Y and cep97

DIOPT Version :9

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_002932323.1 Gene:cep97 / 779623 XenbaseID:XB-GENE-949463 Length:810 Species:Xenopus tropicalis


Alignment Length:596 Identity:121/596 - (20%)
Similarity:233/596 - (39%) Gaps:129/596 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GRRLHQLEPVVL--EQILTMRLEFNNILRIDHLWILPNLTKLCLNCNKIETIENIEMLTNLKDLN 109
            |:.|.:|.|.:.  ....|:.|:.|.|::::|:....||.:|.:..|::..:..:..|.:|:.||
 Frog    19 GQGLQKLSPTLPFGNDTQTLILDKNQIIKLEHMEKCRNLVQLSVANNRLVRMMGVAKLIHLRVLN 83

  Fly   110 LSFNFIEKIENLDTLVNLEVLSLFSNKIEAIENIDMLTMLVIISLGNNLIDTVEGIERFRFMNNL 174
            |..|.|..:|.|..|||||.|:|..|.::.|:.|:..|.|..:.|.:|.|..:..:.:   :.:|
 Frog    84 LPHNSIGYVEGLKDLVNLEWLNLAGNNLKIIDQINSCTSLQHLDLSDNNISQIGDLSK---LKSL 145

  Fly   175 KIINLEGNPIAKRTNFCLLKYISAILPKLNYYEYTFIKSELRAEACNLYYREIREIE-------- 231
            |.:.|.||.||.      |:..||.||:    ..|.:         :|...|||::.        
 Frog   146 KTLLLHGNNIAS------LRAASACLPQ----SLTIL---------SLAENEIRDLNEVAFLAGL 191

  Fly   232 -DKQEKEIQARKFLEREQS----EAKRLASSF---VEHLDGHQLF--DSL---W-------RGDE 276
             |.::..|.....:....|    :.:....|:   ::.|||:.:.  :||   |       |...
 Frog   192 ADLEQLSIMNNPCVMATPSIPGFDYRPFIVSWCLNLKVLDGYVVSQKESLKAEWLYSQGKGRSYR 256

  Fly   277 DGRVLMLVGTQAQELADEYDKDIFELTQEIYKLGLERFTERDEEIRDFFNNLFDGQEELQILGQN 341
            .|:.:.||         :|...:..||.   ..||:  ||.|.::....|.  ....:.|:|.|.
 Frog   257 LGQHIPLV---------QYLATVCPLTS---AHGLQ--TEEDAKLEKILNK--QRLHQKQLLHQT 305

  Fly   342 EIEWFLQFREIIFEEARIRLLKLEQNSMHG-EDEDTPE--NLKLSDALDKLNIQFEDAINDLWQA 403
            ..|.:|....   ...|:.|...:|:..|. ::|.|.:  |...|::.:..:....:..:.....
 Frog   306 RSEGYLTSST---PNKRLPLSPEQQSPTHVLQNEPTVQVNNWLWSNSSEDHSYAVRNICSSSPGP 367

  Fly   404 LMAQELYLHESIQESTINFHRKIAELMSKF---------VEQSQAFFVQ-------LREITLHFS 452
            .....||: |.||......:..:....|.|         |..::.|.|.       |.|..:.|:
 Frog   368 SHYSSLYM-EDIQTDEDKLNCSLLSSESTFMPVAPGLSPVSPTEEFRVPAIKSDLLLNETVIEFN 431

  Fly   453 ENMTEI-------LTRFISTKFALQDFDD--VPIELRVCVDDRDAILNL-------------IAG 495
            ::.||:       :::....:.|:||...  .|:     :.|.:...|:             |:.
 Frog   432 KDSTEMPPTATTEMSKLTQDQTAMQDDQSCVYPV-----IQDENLAENIIHCETSISVESTQISN 491

  Fly   496 MKDYHTLRLDEREDTIATRTKEFVDNMIDQLNSNEVERHRSKILEI--NFFVEMMTDAMTSLPHD 558
            .:..|::.::.::.::..:         |..:.|::....:||...  .|:.......:..:.::
 Frog   492 GQTCHSIIMNSKQSSVLDQ---------DASHLNKINTAATKIQSCWRGFYARKYNPKVKDVCYE 547

  Fly   559 VRDELIAEDYV 569
            :|...:.|..|
 Frog   548 IRLSRMQEHIV 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 5/18 (28%)
LRR_8 81..137 CDD:290566 21/55 (38%)
LRR_4 81..121 CDD:289563 12/39 (31%)
leucine-rich repeat 83..104 CDD:275378 4/20 (20%)
LRR_4 103..143 CDD:289563 17/39 (44%)
leucine-rich repeat 105..126 CDD:275378 9/20 (45%)
LRR_8 126..184 CDD:290566 18/57 (32%)
LRR_4 126..166 CDD:289563 13/39 (33%)
leucine-rich repeat 127..148 CDD:275378 7/20 (35%)
leucine-rich repeat 149..162 CDD:275378 4/12 (33%)
cep97XP_002932323.1 leucine-rich repeat 15..34 CDD:275380 4/14 (29%)
leucine-rich repeat 35..56 CDD:275380 5/20 (25%)
internalin_A <43..>194 CDD:380193 48/172 (28%)
leucine-rich repeat 57..78 CDD:275380 4/20 (20%)
leucine-rich repeat 79..100 CDD:275380 9/20 (45%)
leucine-rich repeat 101..122 CDD:275380 7/20 (35%)
leucine-rich repeat 123..146 CDD:275380 4/25 (16%)
leucine-rich repeat 147..168 CDD:275380 10/30 (33%)
leucine-rich repeat 169..193 CDD:275380 5/32 (16%)
IQ 521..536 CDD:197470 3/14 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.