DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and Lrriq1

DIOPT Version :9

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_011241894.1 Gene:Lrriq1 / 74978 MGIID:1922228 Length:1717 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378
LRR_8 81..137 CDD:290566
LRR_4 81..121 CDD:289563
leucine-rich repeat 83..104 CDD:275378
LRR_4 103..143 CDD:289563
leucine-rich repeat 105..126 CDD:275378
LRR_8 126..184 CDD:290566
LRR_4 126..166 CDD:289563
leucine-rich repeat 127..148 CDD:275378
leucine-rich repeat 149..162 CDD:275378
Lrriq1XP_011241894.1 PTZ00121 <173..657 CDD:173412
internalin_A 808..>1056 CDD:380193
leucine-rich repeat 833..854 CDD:275380
leucine-rich repeat 855..875 CDD:275380
leucine-rich repeat 876..897 CDD:275380
leucine-rich repeat 898..919 CDD:275380
leucine-rich repeat 920..941 CDD:275380
leucine-rich repeat 942..963 CDD:275380
leucine-rich repeat 964..982 CDD:275380
leucine-rich repeat 986..1009 CDD:275380
leucine-rich repeat 1010..1031 CDD:275380
leucine-rich repeat 1058..1084 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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