DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and Drc3

DIOPT Version :9

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_083320.1 Gene:Drc3 / 74665 MGIID:1921915 Length:523 Species:Mus musculus


Alignment Length:543 Identity:171/543 - (31%)
Similarity:298/543 - (54%) Gaps:39/543 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 YPDIEPGIINRSLIESSYLKHVHRGEGRRLHQLEPVVLEQILTMRLEFNNILRIDHLWILPNLTK 85
            |..:||.:::..:::::..:...:.|..:|.:.|.::.:.:|:::|:|.||||||:||...||.|
Mouse     5 YDSMEPKVMDDDMLKAAVGEQGPQEEAGQLAKQEGILFKDVLSLQLDFQNILRIDNLWQFENLKK 69

  Fly    86 LCLNCNKIETIENIEMLTNLKDLNLSFNFIEKIENLDTLVNLEVLSLFSNKIEAIENIDMLTMLV 150
            |.||.|.||.||.:..|.:|..|:||||.||.||.||||||||.|||.:|:|..::::|.|..|.
Mouse    70 LQLNNNIIERIEGLTNLIHLVWLDLSFNNIEAIEGLDTLVNLEDLSLSNNRISKVDSLDALVKLQ 134

  Fly   151 IISLGNNLIDTVEGIERFRFMNNLKIINLEGNPIAKRTNFCLLKYISAILPKLNYYEYTFIKSEL 215
            ::|||||.|..:..|...|....|:.::|.|||:::...:.:  :|.|.|..|.|.::..:..::
Mouse   135 VLSLGNNQISNMMNIIYLRRFPCLRTLSLAGNPVSEAEEYKM--FIYAYLSDLVYLDFRRVDEQM 197

  Fly   216 RAEACNLYYREIREIEDKQEKEIQARKFLEREQSEAKRLAS---SFVEHLDGHQLFDSLWRGDED 277
            |..|...:...|.|:   :.:|.|.:..||.||::.::|..   :|||||:|..||||::..|.:
Mouse   198 REMAKMKHQYSIDEL---KHREAQLQMKLEEEQAKQEKLEEHKMAFVEHLNGPFLFDSMYSEDVE 259

  Fly   278 GRVL-MLVGTQAQELADEYDKDIFELTQEIYKLGLERFTERDEEIRDFFNNLFDGQEELQILGQN 341
            |..| .|.|  .:||.:.|......:...|::.||.:..:|..|: |.||...  ||.:.   :|
Mouse   260 GNKLSYLPG--VRELLEAYKDKFVIICLNIFEYGLNQQEKRKVEL-DTFNECI--QEAIL---EN 316

  Fly   342 EIEWFLQFREIIFEEARIRLLKLEQN---SMHGEDEDTPENLKLSDALDKLNIQFEDAINDLWQA 403
            :            ::.::::.|.|:.   :::...|:|    .||:...||. :..::|.:|:..
Mouse   317 Q------------DQGKLKVAKFEEKHLLNLNAIREET----DLSNIEKKLT-ECTESIGELFNT 364

  Fly   404 LMAQELYLHESIQESTIN-FHRKIAELMSKFVEQSQAFFVQLREITLHFSENMTEILTRFISTKF 467
            ||..|:.|.|.::| ||| |.|.|.:|:..|:|..|:...|.|::..|..|.:.||....:....
Mouse   365 LMILEMQLVEQLEE-TINIFERNITDLVGLFIENVQSLIAQCRDLENHHHEKLLEIAINTLEKIL 428

  Fly   468 ALQDFDDVPIELRVCVDDRDAILNLIAGMKDYHTLRLDEREDTIATRTKEFVDNMIDQLNSNEVE 532
            ..:..:|:|.::|....|:|.|:|.:....|.|.|::|.|||.:.|....:..:::|:::.:|:.
Mouse   429 KGEMDEDLPDDVRALFVDKDTIVNAVGASHDIHLLKIDNREDELVTGINSWCAHLVDKIHKDEIM 493

  Fly   533 RHRSKILEINFFVEMMTDAMTSL 555
            |:|.::.|||.||:.|...:.:|
Mouse   494 RNRKRVKEINQFVDHMQSELDNL 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 10/18 (56%)
LRR_8 81..137 CDD:290566 34/55 (62%)
LRR_4 81..121 CDD:289563 22/39 (56%)
leucine-rich repeat 83..104 CDD:275378 11/20 (55%)
LRR_4 103..143 CDD:289563 23/39 (59%)
leucine-rich repeat 105..126 CDD:275378 14/20 (70%)
LRR_8 126..184 CDD:290566 23/57 (40%)
LRR_4 126..166 CDD:289563 17/39 (44%)
leucine-rich repeat 127..148 CDD:275378 9/20 (45%)
leucine-rich repeat 149..162 CDD:275378 7/12 (58%)
Drc3NP_083320.1 LRR 1 44..65 11/20 (55%)
leucine-rich repeat 47..66 CDD:275378 10/18 (56%)
PPP1R42 53..200 CDD:411060 65/148 (44%)
LRR 2 66..87 11/20 (55%)
leucine-rich repeat 67..88 CDD:275378 11/20 (55%)
LRR 3 88..109 13/20 (65%)
leucine-rich repeat 89..110 CDD:275378 14/20 (70%)
LRR 4 110..131 9/20 (45%)
leucine-rich repeat 111..132 CDD:275378 9/20 (45%)
LRR 5 132..153 8/20 (40%)
leucine-rich repeat 133..157 CDD:275378 9/23 (39%)
leucine-rich repeat 158..169 CDD:275378 5/10 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836002
Domainoid 1 1.000 131 1.000 Domainoid score I5135
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12581
Inparanoid 1 1.050 259 1.000 Inparanoid score I3113
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56411
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006354
OrthoInspector 1 1.000 - - otm43457
orthoMCL 1 0.900 - - OOG6_104691
Panther 1 1.100 - - O PTHR45973
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4624
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.900

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