DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and Lrriq3

DIOPT Version :9

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_083214.2 Gene:Lrriq3 / 74435 MGIID:1921685 Length:633 Species:Mus musculus


Alignment Length:681 Identity:123/681 - (18%)
Similarity:240/681 - (35%) Gaps:213/681 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NRSLIESS----YLKHVHRGEGRRLHQLEPVVLEQILTMR--LEFNNILR-IDHLWILPNLTKLC 87
            |.::||..    ::|:    .|..|..:|.  |:..:::|  :..||.|. |..|.....|.||.
Mouse    20 NENIIEDQKDFVFVKY----SGLHLKSMEN--LQTCISLRVCIFSNNFLTDIQPLQSCKKLIKLD 78

  Fly    88 LNCNKIETIENIEMLTNLKDLNLSF---NFIEKIENLDTL---VNLEVLSLFSNKI---EAIENI 143
            |:.|:|:|:.:....:.||:|.|.:   |...|::|:..|   |:|..|::|...:   :...::
Mouse    79 LHGNQIKTLPDKNFWSGLKNLKLLYLHDNGFSKLKNICVLSGCVSLIGLTMFDCPVSLKKGYRHV 143

  Fly   144 DMLTMLVIISLGNNLIDTVEGI------ERFR------FMN----------------NLKIINLE 180
            .:.::..:.:|.:::|...|.|      |||:      |.|                |:|.|...
Mouse   144 LVNSIWPLKALDHHVISDEEIIQNWRLPERFKTFSPSLFFNLYPALIKGTTYEDEIKNIKHIISR 208

  Fly   181 GNPIAKRTN-----------FCLLKYISAILPKLNYY-------------------------EYT 209
            .|.|....:           |.:.|::|.......:|                         ::.
Mouse   209 INEILAHNSPVLIIQRWIRGFIVRKHLSPYFKHKKHYHGKMIRVLETKLICIGRSDEDKYLEDFF 273

  Fly   210 FIKSELRAEACNL-----YYREIR---------------------EIEDK--QEKEIQARKFLER 246
            |||.|     ||:     :::::|                     |::.|  ..|..|.|..:.:
Mouse   274 FIKPE-----CNIKGKVAHWKQMRYSPADFKYSTEYGKHISCLSYELKTKYIDGKSKQPRHHIHK 333

  Fly   247 EQSEAKRLASSFVEHLDGHQLFDSLWRGDEDGRVLMLVGTQAQELADEYDKDI---FELTQE--- 305
            .|...|  |.|..|.:|......::.......|.|. .|...:|:..:|....   |..|::   
Mouse   334 GQKAMK--AESEDEEVDTEFRISAMKIPLYSSRSLK-YGAMLKEMKWDYFPQYLQPFPATRQKPP 395

  Fly   306 -----IYKLGLER---FTERD-------EEIRDFFNNLFDGQEELQILGQNEIEWFLQFREIIFE 355
                 ::||...|   .|:|.       :::..:::.....:||.:           :|..::..
Mouse   396 VKRETLWKLKKRREFLATQRAGMKLHMFDDVDKYYSEQKQHEEEAR-----------KFAAMVTA 449

  Fly   356 EARIRLLKLEQNSMHGEDEDTPENLKLSDALDKLNIQFEDAINDLWQALMAQELYLHESIQESTI 420
            :     :..|:.|::..::...:.......::|.|...:..:..:|:..:|   || |.::|...
Mouse   450 Q-----VTQERASVNIREKLNKKIYMTRKLMEKDNETIQKGLQQIWRERLA---YL-EKVRERKF 505

  Fly   421 NFHRKIAELMSKFVEQSQAF------------FVQLREITLHFSENMT---EILTRFISTKFALQ 470
            .|   :||......:||...            ..|:..:..|.||...   :::.::...|:. |
Mouse   506 MF---LAEKKLNAADQSLVISLNNERSILLKGITQVERLKKHMSEKKAKHLDVIEKWEEQKYK-Q 566

  Fly   471 DFDDVPIELRVCVDDRDAILNLIAGMKDYHTLRLDEREDTIATRTKEFVDNMIDQLNSNEVERHR 535
            |                    |:..||......:.:|.    ...|..:|.:|.|.....:|..:
Mouse   567 D--------------------LLMEMKKLRVEEIQKRH----CEEKFVIDTLILQKGYERLEEAK 607

  Fly   536 SKILEINFFVEMMTDAMTSLPHDVRDELIAE 566
            :|:..|..|       .||..|..|:|.:.:
Mouse   608 AKVEYIKTF-------YTSKSHKRRNEAMPD 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 6/21 (29%)
LRR_8 81..137 CDD:290566 19/61 (31%)
LRR_4 81..121 CDD:289563 13/42 (31%)
leucine-rich repeat 83..104 CDD:275378 7/20 (35%)
LRR_4 103..143 CDD:289563 12/48 (25%)
leucine-rich repeat 105..126 CDD:275378 8/26 (31%)
LRR_8 126..184 CDD:290566 16/88 (18%)
LRR_4 126..166 CDD:289563 7/48 (15%)
leucine-rich repeat 127..148 CDD:275378 3/23 (13%)
leucine-rich repeat 149..162 CDD:275378 2/12 (17%)
Lrriq3NP_083214.2 LRR_8 51..109 CDD:338972 18/57 (32%)
LRR 1 51..72 6/20 (30%)
leucine-rich repeat 52..73 CDD:275378 6/20 (30%)
LRR 2 73..94 7/20 (35%)
leucine-rich repeat 74..98 CDD:275378 8/23 (35%)
LRR 3 98..119 5/20 (25%)
leucine-rich repeat 99..112 CDD:275378 3/12 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 324..343 5/20 (25%)
SidE <459..630 CDD:289056 37/209 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836016
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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