DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and Ppp1r42

DIOPT Version :10

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_663730.1 Gene:Ppp1r42 / 69312 MGIID:1921138 Length:357 Species:Mus musculus


Alignment Length:333 Identity:72/333 - (21%)
Similarity:128/333 - (38%) Gaps:95/333 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LEQILTMRLEFNNILRIDHLWILPNLTKLCLNCNKIETIENIEMLTNLKDLNLSFNFIEKIENLD 122
            |::|..:.....||..||.|.:..||:.|.|..|:|..:.|:...|||..|.|..|.|..||||.
Mouse    27 LKKITHINFSDRNIDSIDDLSLCRNLSVLYLYDNRISQVTNLNYTTNLTHLYLQNNCISCIENLS 91

  Fly   123 TLVNLEVLSLFSNKIEAIENID------------------------------MLTMLVIISLGNN 157
            :|..||.|.|..|.|..||.::                              :...|..:::.||
Mouse    92 SLKKLEKLYLGGNYIAVIEGLEGLEELRELHVESQRLPLGEKLLFDPRTLRSLAKSLSTLNISNN 156

  Fly   158 LIDTVEGIERFRFMNNLKII-----------------------NLEGNPIAKRTNFCLLKYISAI 199
            .||.::.:|....:|:|..:                       :|.|||:      ||       
Mouse   157 NIDDIKDLEILENLNHLIAVDNQLMHVKDLELLLKKLMKLWKMDLNGNPV------CL------- 208

  Fly   200 LPKLNYYEYTFIKSELRAEACNLYYREIREIEDKQEKEI-------QARKFLEREQSEAKRLASS 257
              |..|.:...:.|:      :|.:.:.:||:|.:.:.:       .|:|..::.:|.::..::|
Mouse   209 --KPKYRDKLILTSK------SLEFLDGKEIKDMERQFLMNWKASKDAKKISKKRRSRSEDASNS 265

  Fly   258 FVEHLDG-HQLFDSLWRGDEDGRVLM-------LVGTQAQELADEYDKDIFELTQEIYKLGLER- 313
            ::.:.:. |.:....:......:|:.       ||...|.....:.||.  .:|::|..|.|:. 
Mouse   266 YISNFETVHHIVPVYYPQVGKPKVIFFSDVQRYLVHGNASSKCSQEDKT--TITEDIGNLSLKES 328

  Fly   314 ---FTERD 318
               .|:.|
Mouse   329 ESSLTKND 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 5/18 (28%)
LRR <80..313 CDD:443914 63/300 (21%)
PPP1R42 82..>176 CDD:455733 35/123 (28%)
leucine-rich repeat 83..104 CDD:275378 6/20 (30%)
leucine-rich repeat 105..126 CDD:275378 10/20 (50%)
leucine-rich repeat 127..148 CDD:275378 8/50 (16%)
leucine-rich repeat 149..162 CDD:275378 5/12 (42%)
Ppp1r42NP_663730.1 PPP1R42 27..246 CDD:411060 55/239 (23%)
LRR 1 29..50 6/20 (30%)
leucine-rich repeat 31..51 CDD:275380 5/19 (26%)
LRR 2 51..72 7/20 (35%)
LRR 3 73..94 10/20 (50%)
leucine-rich repeat 74..95 CDD:275380 10/20 (50%)
LRR 4 95..116 8/20 (40%)
leucine-rich repeat 96..147 CDD:275380 8/50 (16%)
LRR 5 117..138 0/20 (0%)
LRR 6 147..168 6/20 (30%)
leucine-rich repeat 148..169 CDD:275380 6/20 (30%)
LRR 7 169..190 2/20 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..357 2/8 (25%)

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