DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and Lrrc46

DIOPT Version :9

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_081302.2 Gene:Lrrc46 / 69297 MGIID:1916547 Length:323 Species:Mus musculus


Alignment Length:233 Identity:66/233 - (28%)
Similarity:104/233 - (44%) Gaps:36/233 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 EGRRLHQLEPVVLEQILTMRLEFNNILRIDHLWILPNLTKLCLNCNKIETIENIEMLTNLKDLNL 110
            ||  :|..|.::.::.||...:.:...::.|  .|..|..:.|:...|..|.|:|.|.|:..|.|
Mouse    17 EG--VHITEALITKRNLTFPGDEDLSEKMFH--TLGELETVRLDGEGITCIGNLEKLRNIHSLYL 77

  Fly   111 SFNFIEKIENLDTLVNLEVLSLFSNKIEAIENIDMLTMLVIISLGNNLIDTVEGIERFRFMNNLK 175
            ..|.|::||||..:.:|..|||..|:|..:||:..|..|..:.|..|||:|::..|   ...:|.
Mouse    78 QSNKIQRIENLACITSLRFLSLARNQIRHVENLLDLQYLQFLDLSENLIETLKLDE---LPESLL 139

  Fly   176 IINLEGNPIAKRTNFCLLKYISAILPKLNYYEYTFIKSELRAEACNLYYREIREIEDKQEKE--- 237
            |:||.|||...:..:  .|.:...||.|           |..:...:..|...:.|||...:   
Mouse   140 ILNLCGNPCTNQEGY--RKMVIGALPLL-----------LDLDKQPILERWTSDEEDKSSDDDDE 191

  Fly   238 --------IQARKF---LERE--QSEAKRLASSFVEHL 262
                    ...|.|   ||:|  |.:.:|..::..|||
Mouse   192 FPELNGPFCAERGFFKDLEQELHQHQERRQQAALTEHL 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 3/18 (17%)
LRR_8 81..137 CDD:290566 21/55 (38%)
LRR_4 81..121 CDD:289563 14/39 (36%)
leucine-rich repeat 83..104 CDD:275378 7/20 (35%)
LRR_4 103..143 CDD:289563 16/39 (41%)
leucine-rich repeat 105..126 CDD:275378 8/20 (40%)
LRR_8 126..184 CDD:290566 22/57 (39%)
LRR_4 126..166 CDD:289563 15/39 (38%)
leucine-rich repeat 127..148 CDD:275378 9/20 (45%)
leucine-rich repeat 149..162 CDD:275378 5/12 (42%)
Lrrc46NP_081302.2 LRR 1 49..70 6/20 (30%)
LRR_4 50..89 CDD:289563 15/38 (39%)
leucine-rich repeat 50..71 CDD:275378 7/20 (35%)
LRR_8 70..126 CDD:290566 21/55 (38%)
LRR_4 71..110 CDD:289563 16/38 (42%)
LRR 2 71..92 9/20 (45%)
leucine-rich repeat 72..93 CDD:275378 8/20 (40%)
LRR_4 92..130 CDD:289563 15/37 (41%)
LRR 3 93..114 8/20 (40%)
leucine-rich repeat 94..115 CDD:275378 9/20 (45%)
LRR 4 115..135 7/22 (32%)
leucine-rich repeat 116..137 CDD:275378 7/23 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..323
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836010
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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