DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and PPP1R7

DIOPT Version :9

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_002703.1 Gene:PPP1R7 / 5510 HGNCID:9295 Length:360 Species:Homo sapiens


Alignment Length:191 Identity:54/191 - (28%)
Similarity:102/191 - (53%) Gaps:8/191 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IINRSLIESSYLKHVHRGE-----GRRLHQLEPV-VLEQILTMRLEFNNILRIDHLWILPNLTKL 86
            ::|..:.:...|.::|:.:     ..|:..:|.: .|..:.::.|..|.|.::.:|..|.|||.|
Human   171 LVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVL 235

  Fly    87 CLNCNKIETIENIEMLTNLKDLNLSFNFIEKIENLDTLVNLEVLSLFSNKIEAIENIDMLTMLVI 151
            .:..|::..||.::.|.||::|.||.|.||.||.|:....|.:|.:.||:|:.||||..||.|..
Human   236 SMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQE 300

  Fly   152 ISLGNNLIDTVEGIERFRFMNNLKIINLEGNPIAKRTNFCLLKYISAILPKLNYYEYTFIK 212
            ..:.:||:::...::..:...:|:.:.||.||:.|...:  .:.:...||.:...:.||::
Human   301 FWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY--RRKVMLALPSVRQIDATFVR 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 5/18 (28%)
LRR_8 81..137 CDD:290566 23/55 (42%)
LRR_4 81..121 CDD:289563 18/39 (46%)
leucine-rich repeat 83..104 CDD:275378 7/20 (35%)
LRR_4 103..143 CDD:289563 18/39 (46%)
leucine-rich repeat 105..126 CDD:275378 10/20 (50%)
LRR_8 126..184 CDD:290566 18/57 (32%)
LRR_4 126..166 CDD:289563 14/39 (36%)
leucine-rich repeat 127..148 CDD:275378 10/20 (50%)
leucine-rich repeat 149..162 CDD:275378 3/12 (25%)
PPP1R7NP_002703.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64
LRR 1 77..98
internalin_A 87..>317 CDD:380193 44/145 (30%)
LRR 2 99..120
leucine-rich repeat 100..121 CDD:275380
LRR 3 121..142
leucine-rich repeat 122..143 CDD:275380
LRR 4 143..164
leucine-rich repeat 144..165 CDD:275380
LRR 5 165..186 2/14 (14%)
leucine-rich repeat 166..187 CDD:275380 2/15 (13%)
LRR 6 187..208 2/20 (10%)
leucine-rich repeat 188..209 CDD:275380 3/20 (15%)
LRR 7 209..230 4/20 (20%)
leucine-rich repeat 210..231 CDD:275380 5/20 (25%)
LRR 8 231..252 7/20 (35%)
leucine-rich repeat 232..253 CDD:275380 7/20 (35%)
LRR 9 253..274 11/20 (55%)
leucine-rich repeat 254..275 CDD:275380 10/20 (50%)
LRR 10 275..296 9/20 (45%)
leucine-rich repeat 276..297 CDD:275380 10/20 (50%)
LRR 11 297..318 3/20 (15%)
LRRcap 336..354 CDD:197729 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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