DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppr-Y and dnaaf11

DIOPT Version :10

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_001002311.2 Gene:dnaaf11 / 432388 ZFINID:ZDB-GENE-040827-2 Length:440 Species:Danio rerio


Alignment Length:307 Identity:74/307 - (24%)
Similarity:124/307 - (40%) Gaps:64/307 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VLEQILTMRLEFNNILRIDHLWILPNLTKLCLNCNKIETIENI-EMLTNLKDLNLSFNFIEKIEN 120
            :.|.::..|.|.||       ..:.:|.:|.|:...|:.||:| :...:||.|.|..|.|.||||
Zfish     4 ISEDLIRRRAEHNN-------GEIFSLEELSLHQQDIQRIEHIHKWCRDLKILYLQNNLIPKIEN 61

  Fly   121 LDTLVNLEVLSLFSNKIEAIENIDMLTMLVIISLGNNLIDTVEGIERFRFMNNLKIINLEGNPIA 185
            :..|..||.|:|..|.||.|||::....|..:.|..|.:..:..:|..:...:||.:.|.|||.|
Zfish    62 VGRLKKLEYLNLALNNIEVIENLEGCESLQKLDLTVNFVGRLSSVETLKHNLHLKELYLVGNPCA 126

  Fly   186 KRTNFCLLKYISAILPKLNYYEYTFIK--------SELRAEACNLYYREIREIEDKQEKEIQARK 242
            :...:  .:|:.|.:|:|...:...|.        .||.|....:..:|...:|::::::..|.:
Zfish   127 EYHGY--RQYVVATVPQLQSLDGKEISRAERIQALQELDAVRTRVLQQETEYLEEREKQKSNANE 189

  Fly   243 FLEREQS--------------------EAKRLASSFVE---------HLDGHQLFDSLWRGDE-- 276
            ..|..||                    ||:.....|.|         .|:.|:..:...|.:|  
Zfish   190 HPEINQSLSESQNGTQQYPESSSKTHTEAEDEEREFWEKPCPFTPESRLEAHRHLEEKRRANEKE 254

  Fly   277 ---------------DGRVLMLVGTQAQELADEYDKDIFELTQEIYK 308
                           |||||.:...:......|.:.:...|...:|:
Zfish   255 KEKPKTKTPRTLITPDGRVLNVNEPKLDFSLSEDENNCLLLDLNVYR 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 4/18 (22%)
LRR <80..313 CDD:443914 69/284 (24%)
PPP1R42 82..>176 CDD:455733 33/94 (35%)
leucine-rich repeat 83..104 CDD:275378 7/21 (33%)
leucine-rich repeat 105..126 CDD:275378 11/20 (55%)
leucine-rich repeat 127..148 CDD:275378 10/20 (50%)
leucine-rich repeat 149..162 CDD:275378 3/12 (25%)
dnaaf11NP_001002311.2 LRR 1 20..43 7/22 (32%)
LRR 2 44..65 10/20 (50%)
LRR 3 66..89 10/22 (45%)
LRR 4 90..110 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..267 13/88 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 363..440
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.