DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and ppp1r42

DIOPT Version :10

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_001002202.1 Gene:ppp1r42 / 431749 ZFINID:ZDB-GENE-040704-43 Length:329 Species:Danio rerio


Alignment Length:233 Identity:59/233 - (25%)
Similarity:99/233 - (42%) Gaps:43/233 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LPNLTKLCLNCNKIETIENIEMLTNLKDLNLSFNFIEKIENLDTLVNLEVLSLFSNKIEAIENID 144
            |..||.|..:...||.|:::.:..||..|.|..|.|.:|.||....||..|.:.:|.|..|||:.
Zfish    28 LRKLTHLNFSDKNIEEIDDLSVCRNLTVLYLYDNQISQICNLGFASNLTHLYMQNNNISCIENLS 92

  Fly   145 MLTMLVIISLGNNLIDTVEGIERFRFMNNLKIINLEGN--PIAKRTNF------------CLLKY 195
            .|..|..:.||.|.|..|||:|.   :.:||.:::||.  |..::..|            |:|..
Zfish    93 SLHKLSKLFLGGNSITVVEGLEE---LKSLKELHVEGQKLPCGEKLAFDPHSISSLSETLCILNI 154

  Fly   196 ISAILPKLNYYEYTFIKSELRAEACNLYYREIREIEDKQEKEIQAR-------------KFLERE 247
            ....:.:|  ::...::......|.:....:|:|:|....:..:.|             |:.:|.
Zfish   155 SKNNIDEL--WDLAPLRKMTHLFAADNQLHDIQELETVFSQWFKLRLLDLSRNPVCHKPKYRDRL 217

  Fly   248 QSEAKRLASSFVEHLDGHQL------FDSLWRGDEDGR 279
            .:..|     |::.|||.|:      |...|:..:|.:
Zfish   218 ITVCK-----FLDDLDGKQINELSRQFLINWKASKDAK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 1/1 (100%)
LRR <80..313 CDD:443914 59/233 (25%)
PPP1R42 82..>176 CDD:455733 34/93 (37%)
leucine-rich repeat 83..104 CDD:275378 6/20 (30%)
leucine-rich repeat 105..126 CDD:275378 8/20 (40%)
leucine-rich repeat 127..148 CDD:275378 8/20 (40%)
leucine-rich repeat 149..162 CDD:275378 5/12 (42%)
ppp1r42NP_001002202.1 PPP1R42 28..247 CDD:411060 58/228 (25%)
LRR 1 30..51 6/20 (30%)
leucine-rich repeat 31..52 CDD:275380 6/20 (30%)
LRR 2 52..73 9/20 (45%)
leucine-rich repeat 53..74 CDD:275380 8/20 (40%)
LRR 3 74..95 8/20 (40%)
leucine-rich repeat 75..96 CDD:275380 8/20 (40%)
LRR 4 96..117 9/23 (39%)
leucine-rich repeat 97..118 CDD:275380 9/23 (39%)
LRR 5 118..139 6/20 (30%)
leucine-rich repeat 119..144 CDD:275380 6/24 (25%)
leucine-rich repeat 145..170 CDD:275380 3/26 (12%)
LRR 6 148..169 3/22 (14%)
LRR 7 170..191 4/20 (20%)
leucine-rich repeat 171..196 CDD:275380 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..329
Blue background indicates that the domain is not in the aligned region.

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