DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and CG14185

DIOPT Version :10

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster


Alignment Length:175 Identity:35/175 - (20%)
Similarity:75/175 - (42%) Gaps:31/175 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LEPVVLEQ------------ILTMRLEFNNI--LRIDHLWILPNLTKLCLNCNKIETIE-NIEML 102
            |.||||.|            .:|.|.:...:  :|:..:....:|::|.|...:::::: :..:|
  Fly    92 LLPVVLPQQGPEPTLDELLRRVTQRTDLEAVEQVRLRVISYTVSLSRLSLFLPRLQSLDLSGSVL 156

  Fly   103 TNLKD----------LNLSFNFIEKIENLDTLVNLEVLSLFSNKIEAIENIDMLTMLVIISLGNN 157
            ::|:|          |::|...:...:....|..:.||....|.|:.::.:..|..|.::...||
  Fly   157 SSLRDLGYGLLQLTRLDISNCGLNSFDGTSGLPAIRVLIADGNMIQRVDPLAELVHLRVLKARNN 221

  Fly   158 LIDTVEGIERFRFMNNLKIINLEGNPIAKRTNFCLLKYISAILPK 202
            .|..:..:........|:.:.|:|||:      |.|....::|.:
  Fly   222 RISELGLLSFLGMCPQLQEVELQGNPV------CRLPLYRSLLAR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 3/20 (15%)
LRR <80..313 CDD:443914 26/134 (19%)
PPP1R42 82..>176 CDD:455733 19/104 (18%)
leucine-rich repeat 83..104 CDD:275378 4/21 (19%)
leucine-rich repeat 105..126 CDD:275378 5/30 (17%)
leucine-rich repeat 127..148 CDD:275378 5/20 (25%)
leucine-rich repeat 149..162 CDD:275378 4/12 (33%)
CG14185NP_649175.1 leucine-rich repeat 146..168 CDD:275380 3/21 (14%)
PPP1R42 <169..271 CDD:455733 20/98 (20%)
leucine-rich repeat 169..190 CDD:275380 3/20 (15%)
leucine-rich repeat 191..212 CDD:275380 5/20 (25%)
leucine-rich repeat 213..237 CDD:275380 4/23 (17%)

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