DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and Cep97

DIOPT Version :10

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster


Alignment Length:329 Identity:80/329 - (24%)
Similarity:132/329 - (40%) Gaps:92/329 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ESSYLKHVHRGEGRRL---------HQLEPVVLEQ--------------ILTMRLEFNNILRIDH 76
            ||...|||.....::|         |.:..::|::              |.|:.|..|.:||:..
  Fly     5 ESGEEKHVLNLSKQKLKKVPKQDDAHSIRQLILDENELQKIDNIDSYLKIETLSLARNQLLRMYG 69

  Fly    77 LWILPNLTKLCLNCNKIETIENIEMLTNLKDLNLSFNFIEKIENLDTLVNLEVLSLFSNKIEAIE 141
            :..|..|.:|.|:.|.|.:||.::...:|:.|||..|.|:.||:|:|.||||.|:|..|.|.:|.
  Fly    70 VCRLHCLRELNLSFNGILSIEGLKECIHLRVLNLEGNNIKTIEHLNTNVNLECLNLADNSIGSIS 134

  Fly   142 NIDML------------------------TMLVIISLGNNLIDTVEGIERFRFMNNLKIINLEGN 182
            ::..|                        |.|..::|..|.|:.:..|.....::||..|::..|
  Fly   135 DMSYLRNLKELYLHGNRLTHLRQCDKCLPTSLETLTLAKNSINDLNEICTLSHLSNLLSISIADN 199

  Fly   183 PIAKR-------------TNFCL-LKYISAILPKLNYYEYTFIKSELRAEACNLYYREIREIEDK 233
            |....             .|:|: ||||..           |:...:.:......|.:.|     
  Fly   200 PCVTMINSLDGFDYRPFVLNWCMSLKYIDG-----------FVVDPIESLKAEWLYSQGR----- 248

  Fly   234 QEKEIQARKF-LEREQSEAKRLASSFVEHLDGHQLFDSLWRGDEDGRVLMLVGTQAQELADEYDK 297
                  .|:| :..:|..||.|:|  |..|.|..|      .:|:.|.|.|:.::||....:..:
  Fly   249 ------GRQFRVGEQQGLAKYLSS--VCPLVGKAL------ENENDRKLRLILSKAQHHQRQLQE 299

  Fly   298 DIFE 301
            :|.:
  Fly   300 EIMD 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 6/18 (33%)
LRR <80..313 CDD:443914 66/261 (25%)
PPP1R42 82..>176 CDD:455733 35/117 (30%)
leucine-rich repeat 83..104 CDD:275378 7/20 (35%)
leucine-rich repeat 105..126 CDD:275378 10/20 (50%)
leucine-rich repeat 127..148 CDD:275378 8/44 (18%)
leucine-rich repeat 149..162 CDD:275378 4/12 (33%)
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380 3/19 (16%)
PPP1R42 13..229 CDD:455733 54/215 (25%)
leucine-rich repeat 32..53 CDD:275380 1/20 (5%)
leucine-rich repeat 76..97 CDD:275380 7/20 (35%)
leucine-rich repeat 98..119 CDD:275380 10/20 (50%)
leucine-rich repeat 120..141 CDD:275380 8/20 (40%)
leucine-rich repeat 142..165 CDD:275380 0/22 (0%)
leucine-rich repeat 166..190 CDD:275380 5/23 (22%)
IQ 581..599 CDD:197470
Blue background indicates that the domain is not in the aligned region.

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