DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppr-Y and PPP1R42

DIOPT Version :10

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_001351839.1 Gene:PPP1R42 / 286187 HGNCID:33732 Length:271 Species:Homo sapiens


Alignment Length:254 Identity:62/254 - (24%)
Similarity:96/254 - (37%) Gaps:84/254 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LEQILTMRLEFNNILRIDHLWILPNLTKLCLNCNKIETIENIEMLTNLKDLNLSFNFIEKIENLD 122
            |::|..:.....||..|:.|.:..||:.|.|..|.|..|.|:...|||..|.|..|.|..||||.
Human    27 LKKITHINFSDKNIDAIEDLSLCKNLSVLYLYDNCISQITNLNYATNLTHLYLQNNCISCIENLR 91

  Fly   123 TLVNLEVLSLFSNKIEAIENID------------------------------MLTMLVIISLGNN 157
            :|..||.|.|..|.|..||.::                              :...|.|:::.||
Human    92 SLKKLEKLYLGGNYIAVIEGLEGLGELRELHVENQRLPLGEKLLFDPRTLHSLAKSLCILNISNN 156

  Fly   158 LIDTVEGIERFRFMNNL---------------------KI--INLEGNPIAKRTNFCLL-KYISA 198
            .||.:..:|....:|.|                     |:  |:|.|||:      ||. ||...
Human   157 NIDDITDLELLENLNQLIAVDNQLLHVKDLEFLLNKLMKLWKIDLNGNPV------CLKPKYRDR 215

  Fly   199 ILPKLNYYEYTFIKSELRAEACNLYYREIREIEDKQEKEIQARKFLE--REQSEAKRLA 255
            ::                     |..:.:..::.|:.|.|: |:||.  :...:||:::
Human   216 LI---------------------LVSKSLEFLDGKEIKNIE-RQFLMNWKASKDAKKIS 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 4/18 (22%)
LRR <80..313 CDD:443914 56/232 (24%)
PPP1R42 82..>176 CDD:455733 37/144 (26%)
leucine-rich repeat 83..104 CDD:275378 7/20 (35%)
leucine-rich repeat 105..126 CDD:275378 10/20 (50%)
leucine-rich repeat 127..148 CDD:275378 8/50 (16%)
leucine-rich repeat 149..162 CDD:275378 6/12 (50%)
PPP1R42NP_001351839.1 PPP1R42 27..246 CDD:411060 60/246 (24%)
LRR 1 29..50 5/20 (25%)
leucine-rich repeat 31..51 CDD:275380 4/19 (21%)
LRR 2 51..72 8/20 (40%)
LRR 3 73..94 10/20 (50%)
leucine-rich repeat 74..95 CDD:275380 10/20 (50%)
LRR 4 95..116 8/20 (40%)
leucine-rich repeat 96..117 CDD:275380 8/20 (40%)
LRR 5 117..138 0/20 (0%)
leucine-rich repeat 118..147 CDD:275380 0/28 (0%)
LRR 6 147..168 7/20 (35%)
LRR 7 169..190 2/20 (10%)

Return to query results.
Submit another query.