DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and LRRC43

DIOPT Version :10

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_047284614.1 Gene:LRRC43 / 254050 HGNCID:28562 Length:688 Species:Homo sapiens


Alignment Length:430 Identity:89/430 - (20%)
Similarity:151/430 - (35%) Gaps:120/430 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PLVDEVIYPDIEP---------------GIINRSLIESSYLKHVHRGEGRRLHQLEPVVLEQILT 63
            |..::|:.|..|.               .::|.|..|.|:|        |.|....|:.:..  |
Human    68 PREEDVVSPGEETVEALLGLVRSRHSPWALLNNSNAEDSFL--------RELAIRNPLTITD--T 122

  Fly    64 MRLEFNNILRI----------DHLWILPNLTKLCLNCNKIETIENIEMLTNLKDLNLSFNFIEKI 118
            ....:...||:          |.|..| .|.:|.|:.|:|:.::...:...||.|.|..|.|..:
Human   123 FFYSYFRSLRVIDKKVTLVDKDLLKFL-KLEELVLSANRIKEVDATNLPPTLKVLELYGNEISSM 186

  Fly   119 ENL--DTLVNLEVLSLFSNK-IEAIENI--------------DMLT----------MLVIISLG- 155
            |.|  .....|:.|.|..|| :..:|::              ..||          .||.:.|| 
Human   187 ECLCAHPPAGLQHLGLGHNKLLGPLESLYVTANHWLLAPCSPGFLTPRRSCSPSRPNLVSLDLGF 251

  Fly   156 NNLIDTVEGIERFRFMNNLKIINLEGNPIA-----------KRTNFCLLKYISAILPKLNYYEYT 209
            |:|.|....:...|.:.:|:::.|:|||:|           .....|:|..|:....:.:.:...
Human   252 NDLTDLQSMVTSLRTLRHLRLLVLQGNPLALVPYYRGLTIDSLAQLCVLDDITVSPNEKHLFRGL 316

  Fly   210 FIKSELRAEACNLYYR--EIREIEDKQEKEIQAR--------------KFLEREQSEAKRLASSF 258
            .:..:|.|:.......  .||.:.|....:.:.|              .|::.|:.|....|...
Human   317 SLNGDLLAQEAQFVVTIGNIRGVLDTSVLDPEPRPEGPFITYNYYVTYDFVKDEEGEMNESAGVL 381

  Fly   259 VEHLDGHQLFDSLWRGDEDGRVLMLVGTQAQELADEYDKDIFELTQEIYKLGLERFTERDEEIRD 323
            .|.:......:            :||....:|:.::..:||.|...|..:..||...|.      
Human   382 AEIVKPSPSLE------------LLVEESPEEVVEDVIEDIVEEVTEEVEGSLESEVEE------ 428

  Fly   324 FFNNLFDGQEELQIL-GQNEIEWFLQFREIIFEE-ARIRL 361
                  .|:.||.:: |.:.|   ||......|| |::||
Human   429 ------SGESELSVISGPSTI---LQMPRASAEELAKLRL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 6/28 (21%)
LRR <80..313 CDD:443914 58/287 (20%)
PPP1R42 82..>176 CDD:455733 30/121 (25%)
leucine-rich repeat 83..104 CDD:275378 5/20 (25%)
leucine-rich repeat 105..126 CDD:275378 8/22 (36%)
leucine-rich repeat 127..148 CDD:275378 8/45 (18%)
leucine-rich repeat 149..162 CDD:275378 7/13 (54%)
LRRC43XP_047284614.1 PPP1R42 156..310 CDD:455733 36/153 (24%)
leucine-rich repeat 173..196 CDD:275378 8/22 (36%)
leucine-rich repeat 197..243 CDD:275378 8/45 (18%)

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