DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and K10D2.8

DIOPT Version :10

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_001254924.1 Gene:K10D2.8 / 13189483 WormBaseID:WBGene00189952 Length:335 Species:Caenorhabditis elegans


Alignment Length:329 Identity:90/329 - (27%)
Similarity:146/329 - (44%) Gaps:68/329 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDDQINNSEVQKPLVDEVIYPDIEPGIINRSLIESSYLKHVHRGEGRRLHQLEPVVLEQILTMR 65
            ::.::|.:::....::.|:|..:::..|...|||.       ||.:  ::.|.|..  ..|..:.
 Worm     2 LQIEKIVSNKGNGDIIKEIISHNVDEDITELSLIR-------HRIQ--KIWQFENT--PGIRDLS 55

  Fly    66 LEFNNILRIDHLWILPNLTKLCLNCNKIETIENIEMLTNLKDLNLSFNFIEKIENLDTLVNLEVL 130
            |.:|.:.:|||...|.:||:|.||.|:||.:||:|.|.||..|::|:|.|.|||.|..|:|||.|
 Worm    56 LRWNLLKKIDHFQCLTSLTRLNLNDNQIEKLENLETLVNLVFLDVSYNRITKIEGLSELINLEEL 120

  Fly   131 SLFSNK----------------------IEAIENIDMLTMLVIISLGNNLIDTVEG--------- 164
            .|..||                      |:.:||:..|..|..:.||.|.|..:||         
 Worm   121 HLVHNKIITIEGLETNTAMKYLEFGDNRIQKMENLSHLVNLERLFLGANQIRKIEGLDGMAQLKE 185

  Fly   165 ----------IERFRFMNNLKIINLEGNPIAK------RTNFCLLKYISAILPKL-NYYEYTFIK 212
                      ||....::.||.|:|..|.|.|      .||...|.....|:.|| |..::..|.
 Worm   186 LSLPGNALQIIEGLDTLSGLKSISLAQNGIRKIDGLSGLTNLKSLDLNDNIIEKLENVEQFKGIS 250

  Fly   213 S-ELRAEACNLY--YREIREIEDKQEKEIQARKFLEREQSEAKRLASSF--VEHLDGHQLFDSLW 272
            | .:|....|.:  .|:::::|:.....::.......:.:...|:....  |:.|||..:|   |
 Worm   251 SLMIRKNKLNCWQDVRQLKKLENLTVLTMEMNPLYSSDYTYRNRVKEILPDVKLLDGFPIF---W 312

  Fly   273 -RGD 275
             :||
 Worm   313 VQGD 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 6/18 (33%)
LRR <80..313 CDD:443914 73/250 (29%)
PPP1R42 82..>176 CDD:455733 44/134 (33%)
leucine-rich repeat 83..104 CDD:275378 12/20 (60%)
leucine-rich repeat 105..126 CDD:275378 10/20 (50%)
leucine-rich repeat 127..148 CDD:275378 10/42 (24%)
leucine-rich repeat 149..162 CDD:275378 5/12 (42%)
K10D2.8NP_001254924.1 leucine-rich repeat 30..50 CDD:275380 7/30 (23%)
leucine-rich repeat 51..72 CDD:275380 7/20 (35%)
PPP1R42 70..310 CDD:455733 69/239 (29%)
leucine-rich repeat 73..94 CDD:275380 12/20 (60%)
leucine-rich repeat 95..116 CDD:275380 10/20 (50%)
leucine-rich repeat 117..138 CDD:275380 6/20 (30%)
leucine-rich repeat 139..160 CDD:275380 4/20 (20%)
leucine-rich repeat 161..182 CDD:275380 7/20 (35%)
leucine-rich repeat 183..204 CDD:275380 2/20 (10%)
leucine-rich repeat 205..226 CDD:275380 7/20 (35%)
leucine-rich repeat 252..273 CDD:275380 3/20 (15%)

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