DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppr-Y and K10D2.8

DIOPT Version :9

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_001254924.1 Gene:K10D2.8 / 13189483 WormBaseID:WBGene00189952 Length:335 Species:Caenorhabditis elegans


Alignment Length:329 Identity:90/329 - (27%)
Similarity:146/329 - (44%) Gaps:68/329 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDDQINNSEVQKPLVDEVIYPDIEPGIINRSLIESSYLKHVHRGEGRRLHQLEPVVLEQILTMR 65
            ::.::|.:::....::.|:|..:::..|...|||.       ||.:  ::.|.|..  ..|..:.
 Worm     2 LQIEKIVSNKGNGDIIKEIISHNVDEDITELSLIR-------HRIQ--KIWQFENT--PGIRDLS 55

  Fly    66 LEFNNILRIDHLWILPNLTKLCLNCNKIETIENIEMLTNLKDLNLSFNFIEKIENLDTLVNLEVL 130
            |.:|.:.:|||...|.:||:|.||.|:||.:||:|.|.||..|::|:|.|.|||.|..|:|||.|
 Worm    56 LRWNLLKKIDHFQCLTSLTRLNLNDNQIEKLENLETLVNLVFLDVSYNRITKIEGLSELINLEEL 120

  Fly   131 SLFSNK----------------------IEAIENIDMLTMLVIISLGNNLIDTVEG--------- 164
            .|..||                      |:.:||:..|..|..:.||.|.|..:||         
 Worm   121 HLVHNKIITIEGLETNTAMKYLEFGDNRIQKMENLSHLVNLERLFLGANQIRKIEGLDGMAQLKE 185

  Fly   165 ----------IERFRFMNNLKIINLEGNPIAK------RTNFCLLKYISAILPKL-NYYEYTFIK 212
                      ||....::.||.|:|..|.|.|      .||...|.....|:.|| |..::..|.
 Worm   186 LSLPGNALQIIEGLDTLSGLKSISLAQNGIRKIDGLSGLTNLKSLDLNDNIIEKLENVEQFKGIS 250

  Fly   213 S-ELRAEACNLY--YREIREIEDKQEKEIQARKFLEREQSEAKRLASSF--VEHLDGHQLFDSLW 272
            | .:|....|.:  .|:::::|:.....::.......:.:...|:....  |:.|||..:|   |
 Worm   251 SLMIRKNKLNCWQDVRQLKKLENLTVLTMEMNPLYSSDYTYRNRVKEILPDVKLLDGFPIF---W 312

  Fly   273 -RGD 275
             :||
 Worm   313 VQGD 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378 6/18 (33%)
LRR_8 81..137 CDD:290566 30/77 (39%)
LRR_4 81..121 CDD:289563 21/39 (54%)
leucine-rich repeat 83..104 CDD:275378 12/20 (60%)
LRR_4 103..143 CDD:289563 20/61 (33%)
leucine-rich repeat 105..126 CDD:275378 10/20 (50%)
LRR_8 126..184 CDD:290566 25/98 (26%)
LRR_4 126..166 CDD:289563 18/80 (23%)
leucine-rich repeat 127..148 CDD:275378 10/42 (24%)
leucine-rich repeat 149..162 CDD:275378 5/12 (42%)
K10D2.8NP_001254924.1 leucine-rich repeat 30..50 CDD:275380 7/30 (23%)
LRR_4 49..90 CDD:289563 17/40 (43%)
leucine-rich repeat 51..72 CDD:275380 7/20 (35%)
LRR_8 71..127 CDD:290566 29/55 (53%)
LRR_4 71..113 CDD:289563 22/41 (54%)
leucine-rich repeat 73..94 CDD:275380 12/20 (60%)
LRR_4 94..134 CDD:289563 18/39 (46%)
leucine-rich repeat 95..116 CDD:275380 10/20 (50%)
LRR_4 116..157 CDD:289563 10/40 (25%)
leucine-rich repeat 117..138 CDD:275380 6/20 (30%)
leucine-rich repeat 139..160 CDD:275380 4/20 (20%)
LRR_4 160..199 CDD:289563 9/38 (24%)
leucine-rich repeat 161..182 CDD:275380 7/20 (35%)
LRR_8 182..235 CDD:290566 12/52 (23%)
leucine-rich repeat 183..204 CDD:275380 2/20 (10%)
LRR_4 205..245 CDD:289563 14/39 (36%)
leucine-rich repeat 205..226 CDD:275380 7/20 (35%)
leucine-rich repeat 252..273 CDD:275380 3/20 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158748
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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