DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppr-Y and Lrrc49

DIOPT Version :9

Sequence 1:NP_001015502.3 Gene:Ppr-Y / 3355180 FlyBaseID:FBgn0046697 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_663591.3 Gene:Lrrc49 / 102747 MGIID:2442689 Length:752 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppr-YNP_001015502.3 leucine-rich repeat 63..82 CDD:275378
LRR_8 81..137 CDD:290566
LRR_4 81..121 CDD:289563
leucine-rich repeat 83..104 CDD:275378
LRR_4 103..143 CDD:289563
leucine-rich repeat 105..126 CDD:275378
LRR_8 126..184 CDD:290566
LRR_4 126..166 CDD:289563
leucine-rich repeat 127..148 CDD:275378
leucine-rich repeat 149..162 CDD:275378
Lrrc49NP_663591.3 leucine-rich repeat 160..177 CDD:275380
LRR_4 178..219 CDD:289563
leucine-rich repeat 180..201 CDD:275380
LRR_4 200..242 CDD:289563
leucine-rich repeat 202..223 CDD:275380
LRR_8 222..278 CDD:290566
LRR_4 222..264 CDD:289563
leucine-rich repeat 224..245 CDD:275380
LRR_4 244..286 CDD:289563
leucine-rich repeat 246..267 CDD:275380
LRR_8 268..322 CDD:290566
leucine-rich repeat 268..289 CDD:275380
LRR_4 289..329 CDD:289563
leucine-rich repeat 290..311 CDD:275380
leucine-rich repeat 312..336 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.