DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-Y2 and PPX2

DIOPT Version :10

Sequence 1:NP_001015497.4 Gene:Pp1-Y2 / 3355173 FlyBaseID:FBgn0046698 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001330655.1 Gene:PPX2 / 835619 AraportID:AT5G55260 Length:346 Species:Arabidopsis thaliana


Alignment Length:335 Identity:130/335 - (38%)
Similarity:188/335 - (56%) Gaps:55/335 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RRLKQLN----LTETDIRLLCNRSREVFMSQPMLLELSAPVKICGDIHGQFTDLLRLFDYGGYPP 85
            ::::||.    |.|::::.||.::.|:.:.:..:..:.|||.|||||||||.|:..||..||..|
plant     6 KQIEQLKRCEALKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCP 70

  Fly    86 ASNYLFLGDYVDRGKQSIETMCLLLAYK------------------------------------- 113
            .:|||||||:||||..|:||..||||.|                                     
plant    71 KTNYLFLGDFVDRGFYSVETFLLLLALKVIINSPTVVYFGLCKEMNELDGLLCKWVLGSLNFGYF 135

  Fly   114 ----IKYPENFFLLRGNHESAGINRIYGFYDECKRRY-TIKLWRTFVDCYSCMPVSAIVDEKIFC 173
                ::||:...|:||||||..|.::|||||||.|:| ::.:||...|.:..:.:||:|:.||||
plant   136 LHSQVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALVENKIFC 200

  Fly   174 CHGGLSPDLLNMNQIGQLARPCDVPDKGLLCDLLWSDPDPKIMGWSDNDRGVSVTFGADIVGKFV 238
            .||||||.::.::||..:.|..:||..|.:||||||||:..:.||..:.||....||..:|..|.
plant   201 VHGGLSPAIMTLDQIRAIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFN 265

  Fly   239 HRHKFDLICRAHQVVEDGYEFFAKRQLITIFSAPNYCGEFDNAGAMMSVDETLMCSFYVLKP--- 300
            |.:..|.||||||:|.:||::....|::|::||||||....|..|::.:||.|...|.|...   
plant   266 HSNNIDYICRAHQLVMEGYKWMFNSQIVTVWSAPNYCYRCGNVAAILELDENLNKEFRVFDAAPQ 330

  Fly   301 ------SKKP 304
                  :|||
plant   331 ESRGALAKKP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-Y2NP_001015497.4 MPP_PP1_PPKL 13..300 CDD:277359 127/320 (40%)
PPX2NP_001330655.1 MPP_PP2A_PP4_PP6 3..329 CDD:277360 127/322 (39%)

Return to query results.
Submit another query.