DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-Y2 and ppef1

DIOPT Version :9

Sequence 1:NP_001015497.4 Gene:Pp1-Y2 / 3355173 FlyBaseID:FBgn0046698 Length:313 Species:Drosophila melanogaster
Sequence 2:XP_021335306.1 Gene:ppef1 / 559132 ZFINID:ZDB-GENE-080303-27 Length:729 Species:Danio rerio


Alignment Length:469 Identity:114/469 - (24%)
Similarity:180/469 - (38%) Gaps:159/469 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLQMTTLTELNN-----IDQLILRIID--TRRLKQLN------------------LTETDIRLLC 41
            :..:...|::|.     |..|:..::|  |..::||.                  |:.||...|.
Zfish    78 TFMLDNFTQINGNGPDLISHLLDSVVDPLTEEVRQLKYEQIMVPESYSGPRLSFPLSVTDTNALL 142

  Fly    42 NRSRE-----------------VFMSQ-PMLLELSA----PVKICGDIHGQFTDLLRLFDYGGYP 84
            :..:|                 .|:.| |.::.||.    .:.||||:||:..|||.:|...|.|
Zfish   143 SAFKEEQTLHGKYVLQLLYETKKFLKQMPNVIYLSTSYAKEITICGDLHGRLDDLLLIFYKNGLP 207

  Fly    85 PASN-YLFLGDYVDRGKQSIETMCLLLAYKIKYPENFFLLRGNHESAGINRIYGFYDECKRRYTI 148
            .|.| |:|.||:|||||:|.|.:.:|.|:.:.||::..|.|||||...:|..|||..|..::|..
Zfish   208 SAENPYIFNGDFVDRGKKSTEIIIILFAFVLLYPDHMHLNRGNHEDHIMNLRYGFTREVMQKYKT 272

  Fly   149 ---KLWRTFVDCYSCMPVSAIVDEKIFCCHGGLS------------------------------- 179
               ::.:...|.:|.:||:.::|.|:...|||:|                               
Zfish   273 HGREILQLLQDVFSLLPVATVIDNKVLIVHGGISDKTDLDFLSTVERHKVKSALRLPKRSTDHLT 337

  Fly   180 ----------------------------------------------------------------- 179
                                                                             
Zfish   338 VRSCSRSSSRNRGRNSRSSSRHSSRSRRKKLSKQGSRSSSSSSSSSSSSSMCSPRVSAKNTPRRP 402

  Fly   180 -PDLLNMNQIGQL-----ARPCDVPDKGL----LCDLLWSDPDPKIMGWSDND-RGVSVTFGADI 233
             |...:|.|:..|     ..|.::|.:.|    :.|:|||||..: .|.|.|. ||....||.|:
Zfish   403 PPSPTDMLQVPFLDSFVSLEPPELPREELEWQQVVDILWSDPKHQ-NGCSPNSFRGGGCYFGPDV 466

  Fly   234 VGKFVHRHKFDLICRAHQVVEDGYEFFAKRQLITIFSAPNYCGEFDNAGAMMSVDETLMCSFYVL 298
            ....:.:|...|:.|:|:..::|||.....|:||||||.||..|..|.||.:.:...|:..|:..
Zfish   467 TQTLLQKHGLCLLIRSHECKQEGYELCHNGQVITIFSASNYYEEGSNRGAYVKLGPELVPRFFQY 531

  Fly   299 KPSKKPGLRKIHSK 312
            :.|:......:|.:
Zfish   532 QVSRSTRKLTLHQR 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-Y2NP_001015497.4 PTZ00480 10..303 CDD:185658 112/450 (25%)
MPP_PP1_PPKL 13..300 CDD:277359 110/444 (25%)
ppef1XP_021335306.1 IQ 32..54 CDD:197470
MPP_RdgC 132..532 CDD:277364 104/400 (26%)
EFh_PEF 567..715 CDD:330173
EF-hand motif 567..600 CDD:320054
EF-hand motif 609..649 CDD:320054
EFh 650..716 CDD:238008
EF-hand motif 650..683 CDD:320054
EF-hand motif 690..719 CDD:320054
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.