DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-Y2 and PpD3

DIOPT Version :9

Sequence 1:NP_001015497.4 Gene:Pp1-Y2 / 3355173 FlyBaseID:FBgn0046698 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster


Alignment Length:273 Identity:109/273 - (39%)
Similarity:163/273 - (59%) Gaps:16/273 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RLLCNRSREVFM-SQPMLLELSAP----VKICGDIHGQFTDLLRLFDYGGYPPASN-YLFLGDYV 96
            ::||  ..:.:| :||.|::::.|    ..|||||||||.||:.:|:..|.|...| |||.||:|
  Fly   233 KILC--EIDTYMRAQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFV 295

  Fly    97 DRGKQSIETMCLLLAYKIKYPENFFLLRGNHESAGINRIYGFYDECKRRYTIKLWRTFVDCYSCM 161
            |||..|:|.:..|..:|:.||.:|||.||||||..:|::|||..|...:||..:...|...::.:
  Fly   296 DRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQVFNWL 360

  Fly   162 PVSAIVDEKIFCCHGGL-SPDLLNMNQIGQLARPCDVPDKGLLCDLLWSDPDPKIMGWSDNDRGV 225
            |:...:::||...|||| |.:.:.::.|.::.|.|..|::||:|:||||||. :.||...:.|||
  Fly   361 PLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQ-QWMGLGQSKRGV 424

  Fly   226 SVTFGADIVGKFVHRHKFDLICRAHQVVEDGYEFFAKRQLITIFSAPNYCGEFDNAGAMMSVDET 290
            .:.||.|:..||...:..|.|.|:|:|.:.|||.....:.||:|||||||....|.||.:::...
  Fly   425 GIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGN 489

  Fly   291 LMCSFYVLKPSKK 303
                  .|||:.|
  Fly   490 ------NLKPNYK 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-Y2NP_001015497.4 PTZ00480 10..303 CDD:185658 108/271 (40%)
MPP_PP1_PPKL 13..300 CDD:277359 106/268 (40%)
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 109/273 (40%)
PP2Ac 226..502 CDD:197547 109/273 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438735
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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