DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-Y2 and R13A5.11

DIOPT Version :9

Sequence 1:NP_001015497.4 Gene:Pp1-Y2 / 3355173 FlyBaseID:FBgn0046698 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001299879.1 Gene:R13A5.11 / 176075 WormBaseID:WBGene00020053 Length:459 Species:Caenorhabditis elegans


Alignment Length:314 Identity:122/314 - (38%)
Similarity:186/314 - (59%) Gaps:7/314 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLQMTTLTELNNIDQL--ILRIIDTRRLKQLNLTETDIRLLCNRSREVFMSQPMLLELSAPVKI 63
            |:.|..|...::.:|.|  ..::|.. .:.::..|:.:...:...::.:|.|:..|:::..|..:
 Worm   132 MTAQNRTQERIDFVDFLDRHYQVIQA-GVHKIQYTKEEFENVIYEAQTIFSSEKALVDIDPPCVV 195

  Fly    64 CGDIHGQFTDLLRLFDYGGYPPASNYLFLGDYVDRGKQSIETMCLLLAYKIKYPENFFLLRGNHE 128
            .||:||||.||:.:|...|.||.:.|:|.|||||||..|:|.:.||..|||.||||..|||||||
 Worm   196 VGDLHGQFNDLINMFILLGRPPETVYVFTGDYVDRGMMSLECIMLLFTYKICYPENIVLLRGNHE 260

  Fly   129 SAGINRIYGFYDECKR---RYTIKLWRTFVDCYSCMPVSAIVDEKIFCCHGGLSPDLLNMNQIGQ 190
            .|.:|:.||||:||..   :...::|..|..|::.:|:||::..||.|.||||||.|..::::..
 Worm   261 IARVNKKYGFYEECVTSIPKCGEEIWALFQRCFNNLPISALIATKILCMHGGLSPALTCLDELRN 325

  Fly   191 LARPCDVPDKGLLCDLLWSDPDPKIMGWSDNDRGVSVTFGADIVGKFVHRHKFDLICRAHQVVED 255
            ..:|...|.:|::.|:||:||||.:..|..:.||...|||.:::.....|...:||.||||:..|
 Worm   326 HPKPIRNPFRGIVNDMLWADPDPSVFEWKASSRGSGFTFGTNVIDDVCKRLGVELIIRAHQMCFD 390

  Fly   256 GYEFFAKRQLITIFSAPNYCGEFDNAGAMMSVDETLMCSFYVLKPSKKPGLRKI 309
            ||...:.|:||||||||.||..:.|||.::.|||||........|:.: .:.||
 Worm   391 GYWVLSGRKLITIFSAPMYCNFYKNAGCVLKVDETLGIQMIAFVPASE-NIEKI 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-Y2NP_001015497.4 PTZ00480 10..303 CDD:185658 117/297 (39%)
MPP_PP1_PPKL 13..300 CDD:277359 116/291 (40%)
R13A5.11NP_001299879.1 PP2Ac 164..437 CDD:197547 114/272 (42%)
MPP_PPP_family 194..422 CDD:277316 103/227 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D327461at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11668
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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