DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40485 and hsd17b1

DIOPT Version :10

Sequence 1:NP_001036313.1 Gene:CG40485 / 3355165 FlyBaseID:FBgn0069973 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_991147.3 Gene:hsd17b1 / 402842 ZFINID:ZDB-GENE-040901-5 Length:293 Species:Danio rerio


Alignment Length:201 Identity:59/201 - (29%)
Similarity:102/201 - (50%) Gaps:17/201 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VAVVTGASSGIGAAITRKLIS---AGVMVVALARRMDRLEQLREELPQDRRSRLRIMQCDVSDVS 69
            |.::||.|||||.::...|.|   ....|.|..|.:|:.::|.|.:....:..|.|:|.||:|..
Zfish     5 VVLITGCSSGIGLSLAVHLASNPAKAYKVYATMRNLDKKQRLLESVRGLHKDTLDILQMDVTDQQ 69

  Fly    70 SVNAVFDAVQG-DLGNVDILINNAGKLSGGQLLTMSVDTVQQMLQTNVMGVVYCTQRAFESMRQR 133
            |   :.||.:. ..|.:|||:.|||....|.|.|.|:||::.:|..|::|.:...|.....|:::
Zfish    70 S---ILDAQRNVTEGRIDILVCNAGVGLMGPLETHSLDTIRAILDVNLLGTIRTIQTFLPDMKKK 131

  Fly   134 QSKGHVVLINSIVGHYIFNPLPGSQQELNMYPATKHAITALTELFRQEMRDFKTKVKVTSISPGL 198
            : .|.:::..|:.|   ...||.::    :|.|:|.||....|.....::.|  .:.::.|..|.
Zfish   132 R-HGRILVTGSMGG---LQGLPFNE----VYCASKFAIEGACESLAILLQHF--NIHISLIECGP 186

  Fly   199 VDTELV 204
            |:|:.:
Zfish   187 VNTDFL 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40485NP_001036313.1 Rossmann-fold NAD(P)(+)-binding proteins 1..242 CDD:473865 59/201 (29%)
hsd17b1NP_991147.3 None

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