DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40485 and F20G2.1

DIOPT Version :9

Sequence 1:NP_001036313.1 Gene:CG40485 / 3355165 FlyBaseID:FBgn0069973 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_506406.1 Gene:F20G2.1 / 184742 WormBaseID:WBGene00008985 Length:249 Species:Caenorhabditis elegans


Alignment Length:261 Identity:57/261 - (21%)
Similarity:111/261 - (42%) Gaps:47/261 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VVTGASSGIGAAITRKLISAGVMVVALARRMDRLEQLREELPQDRRSRLRIMQCDV---SDVSSV 71
            ::|||:.|||..:.::.|....:.:.:....|  .....||...:.:|:.|:|.|:   ..:..:
 Worm     7 LITGANRGIGLGLLKQFIKNKDVQIIIGTCRD--PSNATELNSIKDTRVHILQLDIDCDDSIRKL 69

  Fly    72 NAVFDAVQGDLGNVDILINNAG-----KLSGGQLLTMSVDTVQQMLQTNVMGVVYCTQRAFESMR 131
            .|..:.:.|:.| :.:||||||     .:.|.:    |..|:.:.|:||.:..|..||.....::
 Worm    70 GAEVEKLVGEDG-LTVLINNAGIFVPYDIDGEK----SRSTLIRQLETNTISTVLITQELLPLLK 129

  Fly   132 QRQSKGH----------VVLINSIVGHYI-----FNPLPGSQQELNMYPATKHAITALTELFRQE 181
            :..:|..          ::.|:|..|...     :| :|     |..|..:|.|:.:..:....:
 Worm   130 RAAAKNRGEGYSINRSAIINISSTAGSITKIDASYN-IP-----LVAYRMSKSALNSFGKSCSVD 188

  Fly   182 MRDFKTKVKVTSISPGLVDTELVPLDYKGLPMLQAEDVANAI---MYVLSTPPHVQV--HELTIK 241
            :.  |..:.||:..||.|.|::...:.|    |:.:|....:   :.:|....|...  .:||:.
 Worm   189 LA--KYHILVTTFCPGWVKTDMGGANGK----LEIDDATKTLSDNILILGDAHHGAYLNADLTVI 247

  Fly   242 P 242
            |
 Worm   248 P 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40485NP_001036313.1 YdfG 1..247 CDD:226674 57/261 (22%)
NADB_Rossmann 1..242 CDD:304358 56/259 (22%)
F20G2.1NP_506406.1 adh_short 4..208 CDD:278532 49/215 (23%)
carb_red_sniffer_like_SDR_c 6..248 CDD:187586 56/259 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160155960
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.