DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab21 and YPT31

DIOPT Version :10

Sequence 1:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_010948.1 Gene:YPT31 / 856753 SGDID:S000000833 Length:223 Species:Saccharomyces cerevisiae


Alignment Length:220 Identity:77/220 - (35%)
Similarity:124/220 - (56%) Gaps:19/220 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERF 76
            |.||.||:|:..|||::|:.|:.::.||....||:...|.:|.:.: ||:|.:..|||||||||:
Yeast    12 LLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI-DGKRIKAQIWDTAGQERY 75

  Fly    77 HALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDE 141
            .|:...||||:.|||:||||:...|::....|:.|||:.....:|:.::|||:||...|||..:|
Yeast    76 RAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEE 140

  Fly   142 ALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNSDDSE 206
            :..:|:.....:.||||..:|.|.:.||.|...:.:::|:.|.|..       |:....|::.:.
Yeast   141 SKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLG-------DSSANGNANGAS 198

  Fly   207 APD---------PGD--PAGQRSCC 220
            ||:         |.:  .|...:||
Yeast   199 APNGPTISLTPTPNENKKANGNNCC 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 65/161 (40%)
YPT31NP_010948.1 Rab11_like 11..175 CDD:206660 66/163 (40%)

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